RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 KLRF2D3W0D1 207 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 ARVCFO00192 962 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 EPHB6O15197 1021 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 GCFC2P16383 781 aaKnown RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 SLC1A4P43007 532 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 CNTN2Q02246 1040 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 RASIP1Q5U651 963 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 MFSD5Q6N075 450 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 TRIM59Q8IWR1 403 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 MYOCDQ8IZQ8 938 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 REXO1Q8N1G1 1221 aaKnown RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 USP38Q8NB14 1042 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 ZNF473Q8WTR7 871 aaKnown RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 SCFD2Q8WU76 684 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 KAT2BQ92831 832 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 GDAP1L1Q96MZ0 367 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.411e-13■■□□□ 11.9
USF1-201ENST00000368019 NT5C3AQ9H0P0 336 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 RIOX1Q9H6W3 641 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 FAM207AQ9NSI2 230 aaPredicted RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 SEC63Q9UGP8 760 aaKnown RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 FBXL5Q9UKA1 691 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 DAAM1Q9Y4D1 1078 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 CTDP1Q9Y5B0 961 aaPredicted RBP12.51□□□□□ -0.41
USF1-201ENST00000368019 ASTN1O14525 1302 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 MROH7Q68CQ1 1323 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 GBF1Q92538 1859 aa12.51□□□□□ -0.41
USF1-201ENST00000368019 SOWAHBA6NEL2 793 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 C5orf60A6NFR6 353 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 GOLGA6L10A6NI86 522 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 ZNF233A6NK53 670 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 CD4P01730 458 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 GLI1P08151 1106 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 LIG3P49916 1009 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 USP11P51784 963 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 STAT2P52630 851 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 SMTNP53814 917 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 NPEPPSP55786 919 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 PDE4CQ08493 712 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 CLUL1Q15846 466 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 CALCRLQ16602 461 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 LETM2Q2VYF4 491 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 TKFCQ3LXA3 575 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 TDRD12Q587J7 1177 aaKnown RBP12.5□□□□□ -0.41
USF1-201ENST00000368019 GNASQ5JWF2 1037 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 TMEM240Q5SV17 173 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 C6orf89Q6UWU4 347 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 FAM160B2Q86V87 743 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 CCDC50Q8IVM0 306 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 MYCBPAPQ8TBZ2 947 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 TBCKQ8TEA7 893 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 CHURC1Q8WUH1 139 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 CASKIN2Q8WXE0 1202 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 TAF4BQ92750 862 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 AGBL1Q96MI9 1066 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 PLEKHA4Q9H4M7 779 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 SLITRK6Q9H5Y7 841 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 SPC25Q9HBM1 224 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 EPB41L5Q9HCM4 733 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 SLC39A2Q9NP94 309 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 SALL4Q9UJQ4 1053 aa12.5□□□□□ -0.41
USF1-201ENST00000368019 GNEQ9Y223 722 aaKnown RBP12.5□□□□□ -0.41
USF1-201ENST00000368019 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.49□□□□□ -0.41
USF1-201ENST00000368019 TMCO5BA8MYB1 307 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 NOL4O94818 638 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 DNAJB2P25686 324 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 PRKCIP41743 596 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 TECP42680 631 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 CARSP49589 748 aaKnown RBP12.49□□□□□ -0.41
USF1-201ENST00000368019 SLC7A5Q01650 507 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 GFPT1Q06210 699 aaPredicted RBP12.49□□□□□ -0.41
USF1-201ENST00000368019 PDCLQ13371 301 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 GRIN2CQ14957 1233 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 ASPRV1Q53RT3 343 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 KCNV1Q6PIU1 500 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 CROCCP2Q86T23 111 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 NLRP14Q86W24 1093 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 RASGEF1CQ8N431 466 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 MAGEC3Q8TD91 643 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 PLIN2Q99541 437 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 GANQ9H2C0 597 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 HOMER2Q9NSB8 354 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 BMP2KQ9NSY1 1161 aaPredicted RBP12.49□□□□□ -0.41
USF1-201ENST00000368019 RNF146Q9NTX7 359 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 TTC7AQ9ULT0 858 aaPredicted RBP12.49□□□□□ -0.41
USF1-201ENST00000368019 NFU1Q9UMS0 254 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 NCOR1O75376 2440 aa12.49□□□□□ -0.41
USF1-201ENST00000368019 ASB14A6NK59 587 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms