RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 HYAL1Q12794 435 aa26.38■■□□□ 1.81
PFDN2-201ENST00000368010 PDE12Q6L8Q7 609 aaKnown RBP26.38■■□□□ 1.81
PFDN2-201ENST00000368010 GBP3Q9H0R5 595 aa26.38■■□□□ 1.81
PFDN2-201ENST00000368010 RNF39Q9H2S5 420 aa26.38■■□□□ 1.81
PFDN2-201ENST00000368010 FBXO2Q9UK22 296 aaPredicted RBP26.38■■□□□ 1.81
PFDN2-201ENST00000368010 MLH1P40692 756 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 KCNQ1P51787 676 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 COL19A1Q14993 1142 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 KARSQ15046 597 aaKnown RBP26.37■■□□□ 1.81
PFDN2-201ENST00000368010 EP400NLQ6ZTU2 488 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 TMEM169Q96HH4 297 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 FAM193BQ96PV7 902 aaPredicted RBP26.37■■□□□ 1.81
PFDN2-201ENST00000368010 CCSER1Q9C0I3 900 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 PDZD7Q9H5P4 517 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 KMT5AQ9NQR1 393 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 GIT1Q9Y2X7 761 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 SRPRBQ9Y5M8 271 aaKnown RBP26.37■■□□□ 1.81
PFDN2-201ENST00000368010 ATG2AQ2TAZ0 1938 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 PHLPP2Q6ZVD8 1323 aa26.37■■□□□ 1.81
PFDN2-201ENST00000368010 TTLL13PA6NNM8 815 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 NT5C1B-RDH14C9J2C7 533 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 K7ERI5 159 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 POMCP01189 267 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 PLCG1P19174 1290 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 AFF1P51825 1210 aaKnown RBP26.36■■□□□ 1.81
PFDN2-201ENST00000368010 ERVFC1P60507 584 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 RAD51AP2Q09MP3 1159 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 ADGRD2Q7Z7M1 963 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 GAD1Q99259 594 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 ADPGKQ9BRR6 497 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 CLDND1Q9NY35 253 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 KCNG1Q9UIX4 513 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 PCDHGC5Q9Y5F6 944 aa26.36■■□□□ 1.81
PFDN2-201ENST00000368010 MORC2Q9Y6X9 1032 aaPredicted RBP26.36■■□□□ 1.81
PFDN2-201ENST00000368010 ARL5CA6NH57 179 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 INPPL1O15357 1258 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 GALTP07902 379 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 SLC39A14Q15043 492 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 ZNF280BQ86YH2 543 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 TCF25Q9BQ70 676 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 IGFLR1Q9H665 355 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 ENTPD7Q9NQZ7 604 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 DNAJB4Q9UDY4 337 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 DAXXQ9UER7 740 aaPredicted RBP26.35■■□□□ 1.81
PFDN2-201ENST00000368010 USP20Q9Y2K6 914 aa26.35■■□□□ 1.81
PFDN2-201ENST00000368010 RBM19Q9Y4C8 960 aaKnown RBP26.35■■□□□ 1.81
PFDN2-201ENST00000368010 MYO7AQ13402 2215 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 REV3LO60673 3130 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 SFI1A8K8P3 1242 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 FSCN2O14926 492 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 DDHD2O94830 711 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 EDN1P05305 212 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 BMP1P13497 986 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 PLS3P13797 630 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 AKAP5P24588 427 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 TXLNAP40222 546 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 SLC11A1P49279 550 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 LEXMQ3ZCV2 418 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 SPECC1Q5M775 1068 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 GPBP1Q86WP2 473 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 ADAMTS19Q8TE59 1207 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 RAD54LQ92698 747 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 EPSTI1Q96J88 318 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 ZFP42Q96MM3 310 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 ZNF396Q96N95 335 aaPredicted RBP26.34■■□□□ 1.81
PFDN2-201ENST00000368010 TMEM175Q9BSA9 504 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 TMEM134Q9H6X4 195 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 NGRNQ9NPE2 291 aaKnown RBP26.34■■□□□ 1.81
PFDN2-201ENST00000368010 BLOC1S4Q9NUP1 217 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 ARHGAP28Q9P2N2 729 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 CCDC39Q9UFE4 941 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 PARP2Q9UGN5 583 aa26.34■■□□□ 1.81
PFDN2-201ENST00000368010 ZMYM2Q9UBW7 1377 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 B4GALT3O60512 393 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 GTF2F1P35269 517 aaKnown RBP eCLIP26.33■■□□□ 1.81
PFDN2-201ENST00000368010 NRIP1P48552 1158 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 NASPP49321 788 aaPredicted RBP26.33■■□□□ 1.81
PFDN2-201ENST00000368010 SCNN1GP51170 649 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 DHX8Q14562 1220 aaKnown RBP26.33■■□□□ 1.81
PFDN2-201ENST00000368010 CTC1Q2NKJ3 1217 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 ATF7IP2Q5U623 682 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 PLPP4Q5VZY2 271 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 TMC7Q7Z402 723 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 RBM23Q86U06 439 aaKnown RBP26.33■■□□□ 1.81
PFDN2-201ENST00000368010 TMEM173Q86WV6 379 aaPredicted RBP26.33■■□□□ 1.81
PFDN2-201ENST00000368010 SPRYD3Q8NCJ5 442 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 LRRC15Q8TF66 581 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 SPIRE2Q8WWL2 714 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 IGSF21Q96ID5 467 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 CLIC6Q96NY7 704 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 TLE6Q9H808 572 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 ODF2LQ9ULJ1 636 aa26.33■■□□□ 1.81
PFDN2-201ENST00000368010 H3BQ06 376 aaPredicted RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 ZSCAN22P10073 491 aaPredicted RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 SMTNP53814 917 aa26.32■■□□□ 1.8
PFDN2-201ENST00000368010 CACNB1Q02641 598 aaPredicted RBP26.32■■□□□ 1.8
PFDN2-201ENST00000368010 STK38Q15208 465 aa26.32■■□□□ 1.8
PFDN2-201ENST00000368010 DCAF4L1Q3SXM0 396 aa26.32■■□□□ 1.8
PFDN2-201ENST00000368010 ARSHQ5FYA8 562 aa26.32■■□□□ 1.8
PFDN2-201ENST00000368010 NT5DC1Q5TFE4 455 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms