RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CDCA2Q69YH5 1023 aaPredicted RBP16.19■□□□□ 0.18
SF3B5-201ENST00000367569 C1orf186Q6ZWK4 172 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 RBM23Q86U06 439 aaKnown RBP16.19■□□□□ 0.18
SF3B5-201ENST00000367569 ZBTB8OSQ8IWT0 167 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 ABI1Q8IZP0 508 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 MSLNLQ96KJ4 702 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 ZNF396Q96N95 335 aaPredicted RBP16.19■□□□□ 0.18
SF3B5-201ENST00000367569 PANK2Q9BZ23 570 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 NXF3Q9H4D5 531 aaKnown RBP16.19■□□□□ 0.18
SF3B5-201ENST00000367569 TYW1Q9NV66 732 aaKnown RBP16.19■□□□□ 0.18
SF3B5-201ENST00000367569 CLEC1BQ9P126 229 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 CD207Q9UJ71 328 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 HCN4Q9Y3Q4 1203 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 PCDHB2Q9Y5E7 798 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 PCDHB12Q9Y5F1 795 aa16.19■□□□□ 0.18
SF3B5-201ENST00000367569 A0A087X0B3 334 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 DCXO43602 365 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 NCLP19338 710 aaKnown RBP16.18■□□□□ 0.18
SF3B5-201ENST00000367569 NAMPTP43490 491 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 NRIP1P48552 1158 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 NDUFV1P49821 464 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 AFF1P51825 1210 aaKnown RBP16.18■□□□□ 0.18
SF3B5-201ENST00000367569 SMAD4Q13485 552 aaKnown RBP16.18■□□□□ 0.18
SF3B5-201ENST00000367569 SLC39A14Q15043 492 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 LRRC55Q6ZSA7 311 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 IFNLR1Q8IU57 520 aaPredicted RBP16.18■□□□□ 0.18
SF3B5-201ENST00000367569 EFHBQ8N7U6 833 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 PDILTQ8N807 584 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 KRI1Q8N9T8 703 aaKnown RBP16.18■□□□□ 0.18
SF3B5-201ENST00000367569 LINC00301Q8NCQ3 95 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 RAD54LQ92698 747 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 PPP2R3CQ969Q6 453 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 IFT74Q96LB3 600 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 CASD1Q96PB1 797 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 CCDC113Q9H0I3 377 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 GBP3Q9H0R5 595 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 ELAC1Q9H777 363 aaKnown RBP16.18■□□□□ 0.18
SF3B5-201ENST00000367569 CHST12Q9NRB3 414 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 SRPRBQ9Y5M8 271 aaKnown RBP16.18■□□□□ 0.18
SF3B5-201ENST00000367569 MUC6Q6W4X9 2439 aa16.18■□□□□ 0.18
SF3B5-201ENST00000367569 PRR33A8MZF0 331 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 SPTLC2O15270 562 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 SLC16A4O15374 487 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 B4GALT3O60512 393 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 FGF18O76093 207 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 NPTX2P47972 431 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 ERVFC1P60507 584 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 ARSHQ5FYA8 562 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 EEF1DP3Q658K8 133 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 NOTUMQ6P988 496 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 LRRC43Q8N309 656 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 SYT2Q8N9I0 419 aaPredicted RBP16.17■□□□□ 0.18
SF3B5-201ENST00000367569 COLGALT1Q8NBJ5 622 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 SMG8Q8ND04 991 aaKnown RBP16.17■□□□□ 0.18
SF3B5-201ENST00000367569 MICAL1Q8TDZ2 1067 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 KIFAP3Q92845 792 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 REEP2Q9BRK0 252 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 TMEM117Q9H0C3 514 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 ZHX3Q9H4I2 956 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 CWH43Q9H720 699 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 AAASQ9NRG9 546 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
SF3B5-201ENST00000367569 ARIH1Q9Y4X5 557 aaPredicted RBP16.17■□□□□ 0.18
SF3B5-201ENST00000367569 IPPQ9Y573 584 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 CNTNAP2Q9UHC6 1331 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 TRIP11Q15643 1979 aa16.17■□□□□ 0.18
SF3B5-201ENST00000367569 PER2O15055 1255 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 GLP2RO95838 553 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 KRT18P05783 430 aaKnown RBP16.16■□□□□ 0.18
SF3B5-201ENST00000367569 RAB27AP51159 221 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 UBE3AQ05086 875 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 DMP1Q13316 513 aaPredicted RBP16.16■□□□□ 0.18
SF3B5-201ENST00000367569 PRPF4BQ13523 1007 aaKnown RBP16.16■□□□□ 0.18
SF3B5-201ENST00000367569 BECN1Q14457 450 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 PPP2R5AQ15172 486 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 AGMOQ6ZNB7 445 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 LARP4BQ92615 738 aaKnown RBP16.16■□□□□ 0.18
SF3B5-201ENST00000367569 NFKBIZQ9BYH8 718 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 TRIM6Q9C030 488 aaPredicted RBP16.16■□□□□ 0.18
SF3B5-201ENST00000367569 PDZD7Q9H5P4 517 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 TLE6Q9H808 572 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 TLR9Q9NR96 1032 aa16.16■□□□□ 0.18
SF3B5-201ENST00000367569 PRMT7Q9NVM4 692 aaPredicted RBP16.16■□□□□ 0.18
SF3B5-201ENST00000367569 BARX2Q9UMQ3 279 aaPredicted RBP16.16■□□□□ 0.18
SF3B5-201ENST00000367569 NT5C1B-RDH14C9J2C7 533 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 ZC3H11AO75152 810 aaKnown RBP eCLIP16.15■□□□□ 0.189e-6■■□□□ 13.5
SF3B5-201ENST00000367569 TRIOO75962 3097 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 BRD1O95696 1058 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 HARSP12081 509 aaKnown RBP16.15■□□□□ 0.18
SF3B5-201ENST00000367569 AKAP5P24588 427 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 GUCY2CP25092 1073 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 TXLNAP40222 546 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 MLH1P40692 756 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 RBM10P98175 930 aaKnown RBP16.15■□□□□ 0.18
SF3B5-201ENST00000367569 COASYQ13057 564 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 MAPK6Q16659 721 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 DYMQ7RTS9 669 aa16.15■□□□□ 0.18
SF3B5-201ENST00000367569 TAS1R3Q7RTX0 852 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms