RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 FAM192AQ9GZU8 254 aa13.02□□□□□ -0.32
SHPRH-202ENST00000367503 CCDC134Q9H6E4 229 aa13.02□□□□□ -0.32
SHPRH-202ENST00000367503 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.32
SHPRH-202ENST00000367503 A6NJR5 290 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 ALDH18A1P54886 795 aaKnown RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 IRGCQ6NXR0 463 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 DARS2Q6PI48 645 aaKnown RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 JAMLQ86YT9 394 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 MYLK4Q86YV6 388 aaPredicted RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 ZBED8Q8IZ13 594 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 PARD3BQ8TEW8 1205 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 BTBD6Q96KE9 485 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 POLR3CQ9BUI4 534 aaPredicted RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 TRIM33Q9UPN9 1127 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 USP31Q70CQ4 1352 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 CRB1P82279 1406 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 R3HDM1Q15032 1099 aaKnown RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 SYDE2Q5VT97 1194 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 RNF217Q8TC41 542 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 RXFP1Q9HBX9 757 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 HECW2Q9P2P5 1572 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 TMEM94Q12767 1356 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 SH3BP5O60239 455 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 RFC5P40937 340 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 DDI1Q8WTU0 396 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 DNAJC7Q99615 494 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 CELF4Q9BZC1 486 aaKnown RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 PABPC3Q9H361 631 aaKnown RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.33
SHPRH-202ENST00000367503 PNPLA7Q6ZV29 1317 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 AK9Q5TCS8 1911 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 CPDO75976 1380 aa13.02□□□□□ -0.33
SHPRH-202ENST00000367503 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 DCAF15Q66K64 600 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 HACE1Q8IYU2 909 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 CCSER1Q9C0I3 900 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 ANAPC7Q9UJX3 599 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 SETBP1Q9Y6X0 1596 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 RSPH10B2B2RC85 870 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 NR3C1P04150 777 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 RSPH10BP0C881 870 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 PDIA2Q13087 525 aaKnown RBP13.01□□□□□ -0.33
SHPRH-202ENST00000367503 HP1BP3Q5SSJ5 553 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-202ENST00000367503 TBC1D9BQ66K14 1250 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 KLHL23Q8NBE8 558 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 C1orf54Q8WWF1 131 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 CDHR1Q96JP9 859 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 TTC7AQ9ULT0 858 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-202ENST00000367503 GRM4Q14833 912 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 WASHC2DQ5SRD0 308 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 METTL13Q8N6R0 699 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 ATP11CQ8NB49 1132 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 SCHIP1Q9P0W5 487 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-202ENST00000367503 PI4KBQ9UBF8 816 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 ARAP3Q8WWN8 1544 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 SYCE1LA8MT33 242 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 GOLGA8SH3BPF8 625 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 GOLGA8MH3BSY2 632 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 CCDC15Q0P6D6 951 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 COASYQ13057 564 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 FAM160B1Q5W0V3 765 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 KRT39Q6A163 491 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 ACAD11Q709F0 780 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
SHPRH-202ENST00000367503 A1CFQ9NQ94 594 aaKnown RBP13.01□□□□□ -0.33
SHPRH-202ENST00000367503 BARHL2Q9NY43 387 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
SHPRH-202ENST00000367503 RNF17Q9BXT8 1623 aaKnown RBP13□□□□□ -0.33
SHPRH-202ENST00000367503 PFASO15067 1338 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 POTEMA6NI47 508 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 H3BRJ5 948 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 APOA1P02647 267 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 ITIH2P19823 946 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 FOXO4P98177 505 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 SPICE1Q8N0Z3 855 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 FLAD1Q8NFF5 587 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 CEP170P1Q96L14 293 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 STX18Q9P2W9 335 aaKnown RBP13□□□□□ -0.33
SHPRH-202ENST00000367503 TLK1Q9UKI8 766 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 FIS1Q9Y3D6 152 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 CTDNEP1O95476 244 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 ALDH5A1P51649 535 aaPredicted RBP13□□□□□ -0.33
SHPRH-202ENST00000367503 HLFQ16534 295 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 TRIM16LQ309B1 348 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 Q4G0T1 1027 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 ZNF564Q8TBZ8 553 aaPredicted RBP13□□□□□ -0.33
SHPRH-202ENST00000367503 AGAP11Q8TF27 550 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 FAM20AQ96MK3 541 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 ADA2Q9NZK5 511 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 CNOT8Q9UFF9 292 aaKnown RBP13□□□□□ -0.33
SHPRH-202ENST00000367503 TRAPPC3O43617 180 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 GFAPP14136 432 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 CASP2P42575 452 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 HERVK_113P62684 666 aa13□□□□□ -0.33
SHPRH-202ENST00000367503 NAALADL2Q58DX5 795 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms