RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TMEM127O75204 238 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 PDE5AO76074 875 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 TRIM27P14373 513 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 SRSF11Q05519 484 aaKnown RBP9.17□□□□□ -0.94
SYNE1-206ENST00000367253 ALCAMQ13740 583 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 CCNG2Q16589 344 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 CWF19L2Q2TBE0 894 aaKnown RBP9.17□□□□□ -0.94
SYNE1-206ENST00000367253 SAMD7Q7Z3H4 446 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 CTAGE3PQ8IX95 158 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 CCDC13Q8IYE1 715 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 RUBCNQ92622 972 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 ZNF512Q96ME7 567 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-206ENST00000367253 C1QTNF7Q9BXJ2 289 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 VPS16Q9H269 839 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 PDE11AQ9HCR9 933 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 ANGPTL2Q9UKU9 493 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 PNPLA6Q8IY17 1366 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 UBXN8O00124 270 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 CHL1O00533 1208 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 INPP4BO15327 924 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 SORBS3O60504 671 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 ZNF574Q6ZN55 896 aaPredicted RBP9.17□□□□□ -0.94
SYNE1-206ENST00000367253 LRRC47Q8N1G4 583 aaKnown RBP9.17□□□□□ -0.94
SYNE1-206ENST00000367253 CHST13Q8NET6 341 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 SUN5Q8TC36 379 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 TDRD3Q9H7E2 651 aaKnown RBP9.17□□□□□ -0.94
SYNE1-206ENST00000367253 KMT5AQ9NQR1 393 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 TBC1D22BQ9NU19 505 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.17□□□□□ -0.94
SYNE1-206ENST00000367253 DAB1O75553 588 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 GNA14O95837 355 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 KRT76Q01546 638 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 ASIC2Q16515 512 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 LRRC8CQ8TDW0 803 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 RAPGEF5Q92565 580 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 CCDC28BQ9BUN5 200 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 STMN3Q9NZ72 180 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 KANSL3Q9P2N6 904 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 MAD1L1Q9Y6D9 718 aa9.17□□□□□ -0.94
SYNE1-206ENST00000367253 MROH7-TTC4A0A0A0MT08 1334 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 OR52Z1P0C646 297 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 TMTC4Q5T4D3 741 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 HIBCHQ6NVY1 386 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 CASC4Q6P4E1 433 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 PEX26Q7Z412 305 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 FAM133AQ8N9E0 248 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 PPWD1Q96BP3 646 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 TCF25Q9BQ70 676 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 BICC1Q9H694 974 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 SENP2Q9HC62 589 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 SYTL2Q9HCH5 934 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 RPRD1BQ9NQG5 326 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 ZNF521Q96K83 1311 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 SDSP20132 328 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 EEF1B2P24534 225 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 ANO5Q75V66 913 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 BZW1Q7L1Q6 419 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 B3GALNT2Q8NCR0 500 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 SLAIN1Q8ND83 568 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 FBXO18Q8NFZ0 1043 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 ESYT1Q9BSJ8 1104 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 FANCFQ9NPI8 374 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 KIAA1468Q9P260 1216 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 PACSIN2Q9UNF0 486 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 RPH3AQ9Y2J0 694 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 ORC6Q9Y5N6 252 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 PTPRUQ92729 1446 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 MAGEC1O60732 1142 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 TRPC1P48995 793 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 CLCN2P51788 898 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 NXNQ6DKJ4 435 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 TRAF7Q6Q0C0 670 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 SEPT1Q8WYJ6 367 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 RMDN3Q96TC7 470 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 PSMB7Q99436 277 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 SMARCAD1Q9H4L7 1026 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 TXLNGQ9NUQ3 528 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 VTI1BQ9UEU0 232 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 PCDHA12Q9UN75 941 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 CXCL11O14625 94 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 CYTH3O43739 400 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 CARSP49589 748 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 ETF1P62495 437 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 ADCY2Q08462 1091 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 STX3Q13277 289 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 TEAD4Q15561 434 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 FIBCD1Q8N539 461 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 CALML6Q8TD86 181 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 QKIQ96PU8 341 aaKnown RBP eCLIP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 SLITRK1Q96PX8 696 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 PLEKHF1Q96S99 279 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 SENP6Q9GZR1 1112 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 EPC1Q9H2F5 836 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 INTS9Q9NV88 658 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 TJP2Q9UDY2 1190 aa9.16□□□□□ -0.94
SYNE1-206ENST00000367253 WBP11Q9Y2W2 641 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 RBM8AQ9Y5S9 174 aaKnown RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 MAGED1Q9Y5V3 778 aaPredicted RBP9.16□□□□□ -0.94
SYNE1-206ENST00000367253 CDC42BPGQ6DT37 1551 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms