RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 SPTLC2O15270 562 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 B4GALT5O43286 388 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 DDIT3P35638 169 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 CEBPZQ03701 1054 aaKnown RBP16.12■□□□□ 0.17
MRPL55-218ENST00000366747 RNASELQ05823 741 aaKnown RBP16.12■□□□□ 0.17
MRPL55-218ENST00000366747 GPBP1Q86WP2 473 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 SMG8Q8ND04 991 aaKnown RBP16.12■□□□□ 0.17
MRPL55-218ENST00000366747 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
MRPL55-218ENST00000366747 SYMPKQ92797 1274 aaKnown RBP16.12■□□□□ 0.17
MRPL55-218ENST00000366747 LPPQ93052 612 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 HLA-CQ95604 372 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 PLIN2Q99541 437 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 TMEM175Q9BSA9 504 aa16.12■□□□□ 0.17
MRPL55-218ENST00000366747 EIF2AQ9BY44 585 aaKnown RBP16.12■□□□□ 0.17
MRPL55-218ENST00000366747 ZNF131P52739 623 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 MRPS5P82675 430 aaKnown RBP16.11■□□□□ 0.17
MRPL55-218ENST00000366747 BMS1Q14692 1282 aaKnown RBP16.11■□□□□ 0.17
MRPL55-218ENST00000366747 COL19A1Q14993 1142 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 RRAGBQ5VZM2 374 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 SLC39A11Q8N1S5 342 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 POF1BQ8WVV4 589 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 EPSTI1Q96J88 318 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 FAM193BQ96PV7 902 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-218ENST00000366747 MRPL4Q9BYD3 311 aaKnown RBP16.11■□□□□ 0.17
MRPL55-218ENST00000366747 PDZD7Q9H5P4 517 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 ALG13Q9NP73 1137 aaKnown RBP16.11■□□□□ 0.17
MRPL55-218ENST00000366747 NGRNQ9NPE2 291 aaKnown RBP16.11■□□□□ 0.17
MRPL55-218ENST00000366747 TLR9Q9NR96 1032 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 TNFSF13BQ9Y275 285 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 ATP6V1DQ9Y5K8 247 aa16.11■□□□□ 0.17
MRPL55-218ENST00000366747 PRRC2BQ5JSZ5 2229 aaKnown RBP16.11■□□□□ 0.17
MRPL55-218ENST00000366747 MEIS3P2A8K0S8 358 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 CUTAO60888 179 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 NPTXRO95502 500 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 BCAR1P56945 870 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 STRN3Q13033 797 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 ARSHQ5FYA8 562 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 ATF7IP2Q5U623 682 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 TMEM169Q96HH4 297 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 KIFC3Q9BVG8 833 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 CUEDC2Q9H467 287 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 NXF3Q9H4D5 531 aaKnown RBP16.1■□□□□ 0.17
MRPL55-218ENST00000366747 NRDE2Q9H7Z3 1164 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 PARVGQ9HBI0 331 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 INPP5FQ9Y2H2 1132 aa16.1■□□□□ 0.17
MRPL55-218ENST00000366747 ARL5CA6NH57 179 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 ZC3H11AO75152 810 aaKnown RBP eCLIP16.09■□□□□ 0.17
MRPL55-218ENST00000366747 TBCAO75347 108 aaKnown RBP16.09■□□□□ 0.17
MRPL55-218ENST00000366747 NR1I2O75469 434 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 FAM13AO94988 1023 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 BRD1O95696 1058 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 KRT18P05783 430 aaKnown RBP16.09■□□□□ 0.17
MRPL55-218ENST00000366747 GRIK3Q13003 919 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 CAMK1Q14012 370 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 MCM6Q14566 821 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 TCEAL5Q5H9L2 206 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 TJAP1Q5JTD0 557 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 ZPBP2Q6X784 338 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 TMEM161BQ8NDZ6 487 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 PABPC5Q96DU9 382 aaKnown RBP16.09■□□□□ 0.17
MRPL55-218ENST00000366747 CLIC6Q96NY7 704 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 RPS6KC1Q96S38 1066 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 CDCA3Q99618 268 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-218ENST00000366747 REEP2Q9BRK0 252 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 HCSTQ9UBK5 93 aa16.09■□□□□ 0.17
MRPL55-218ENST00000366747 TRANK1O15050 2925 aa16.08■□□□□ 0.17
MRPL55-218ENST00000366747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-218ENST00000366747 SLC16A4O15374 487 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 ALDH2P05091 517 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 GALTP07902 379 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 MLH1P40692 756 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 NCKAP1LP55160 1127 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 GIT2Q14161 759 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 SPECC1Q5M775 1068 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 NT5DC1Q5TFE4 455 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 USP49Q70CQ1 688 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 SV2BQ7L1I2 683 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 ASB2Q96Q27 587 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 GAD1Q99259 594 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 ACO2Q99798 780 aaKnown RBP16.08■□□□□ 0.16
MRPL55-218ENST00000366747 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.16
MRPL55-218ENST00000366747 LRRC27Q9C0I9 530 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 SEL1LQ9UBV2 794 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 HES2Q9Y543 173 aa16.08■□□□□ 0.16
MRPL55-218ENST00000366747 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 FSCN2O14926 492 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 TOM1L1O75674 476 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 MAPTP10636 758 aaKnown RBP16.07■□□□□ 0.16
MRPL55-218ENST00000366747 LIG1P18858 919 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 DNAJB1P25685 340 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 STAT6P42226 847 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 DSC1Q08554 894 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 RAD51AP2Q09MP3 1159 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 PKP1Q13835 747 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 PUS10Q3MIT2 529 aaKnown RBP16.07■□□□□ 0.16
MRPL55-218ENST00000366747 LONRF3Q496Y0 759 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 DDX53Q86TM3 631 aaKnown RBP16.07■□□□□ 0.16
MRPL55-218ENST00000366747 SPRYD3Q8NCJ5 442 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 LRRC15Q8TF66 581 aa16.07■□□□□ 0.16
MRPL55-218ENST00000366747 IGSF21Q96ID5 467 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms