RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 NBEAQ8NFP9 2946 aa9.63□□□□□ -0.87
HMGB1P39-201ENST00000366304 DSPP15924 2871 aaKnown RBP9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 IGLV3-22A0A075B6J6 115 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 TBC1D4O60343 1298 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 NCLP19338 710 aaKnown RBP9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 HOXC13P31276 330 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 AK2P54819 239 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 PTH1RQ03431 593 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 MTAPQ13126 283 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 MLF2Q15773 248 aaPredicted RBP9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 PALB2Q86YC2 1186 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 RNF168Q8IYW5 571 aaPredicted RBP9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 NETO1Q8TDF5 533 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 STAMQ92783 540 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 TRAIPQ9BWF2 469 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 LNPKQ9C0E8 428 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 RXFP1Q9HBX9 757 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 MRPL17Q9NRX2 175 aaKnown RBP9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 PLA2G2EQ9NZK7 142 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 ANGPTL2Q9UKU9 493 aa9.62□□□□□ -0.87
HMGB1P39-201ENST00000366304 NRP1O14786 923 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 TM4SF5O14894 197 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 GLUD1P00367 558 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 SMARCA1P28370 1054 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 KIF5BP33176 963 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 SHC2P98077 582 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 RNASELQ05823 741 aaKnown RBP9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 DMWDQ09019 674 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 SRSF5Q13243 272 aaKnown RBP9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 UGCGQ16739 394 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 WWC2Q6AWC2 1192 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 MIS18BP1Q6P0N0 1132 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 LILRA6Q6PI73 481 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 GLB1LQ6UWU2 654 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 CATIPQ7Z7H3 387 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 CKAP2LQ8IYA6 745 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 MB21D2Q8IYB1 491 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 CCDC82Q8N4S0 544 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 ITFG1Q8TB96 612 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 MAP4K1Q92918 833 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 SHDQ96IW2 340 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 KXD1Q9BQD3 176 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 HERC2P3Q9BVR0 1158 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 DIAPH3Q9NSV4 1193 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 GABBR1Q9UBS5 961 aa9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 SEC63Q9UGP8 760 aaKnown RBP9.61□□□□□ -0.87
HMGB1P39-201ENST00000366304 TMEM150BA6NC51 233 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 E7EWF7 191 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 TGM5O43548 720 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 SOD2P04179 222 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 RPL17P18621 184 aaKnown RBP9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 SREBF1P36956 1147 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 CYP26C1Q6V0L0 522 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 PRR23CQ6ZRP0 262 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 HEATR3Q7Z4Q2 680 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 GLYCTKQ8IVS8 523 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 NLRP7Q8WX94 980 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 CRYGNQ8WXF5 182 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 SECISBP2LQ93073 1101 aaKnown RBP9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 COL26A1Q96A83 441 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 BORCS6Q96GS4 357 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 CEP89Q96ST8 783 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 MAP7D2Q96T17 732 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 MAP3K14Q99558 947 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 ANO3Q9BYT9 981 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 OSBPL6Q9BZF3 934 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 PRKD2Q9BZL6 878 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 PLA2G2FQ9BZM2 168 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 RXFP3Q9NSD7 469 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 SEMA4GQ9NTN9 838 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 FAM105AQ9NUU6 356 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 PRG3Q9Y2Y8 225 aaPredicted RBP9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 FLNBO75369 2602 aaKnown RBP9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 MIA3Q5JRA6 1907 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 MYH15Q9Y2K3 1946 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 DOCK6Q96HP0 2047 aa9.6□□□□□ -0.87
HMGB1P39-201ENST00000366304 A0A087WZ62 844 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 C1QTNF9BB2RNN3 333 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 IPO5O00410 1097 aaKnown RBP9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 MAGEB2O15479 319 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 EDIL3O43854 480 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 ZNF623O75123 536 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 DDAH1O94760 285 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 STBD1O95210 358 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 POMCP01189 267 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 URODP06132 367 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 PROS1P07225 676 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 ADH1AP07327 375 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 C1QTNF9P0C862 333 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 FSHRP23945 695 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 RPS9P46781 194 aaKnown RBP9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 DSG1Q02413 1049 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 PRKCQQ04759 706 aa9.59□□□□□ -0.87
HMGB1P39-201ENST00000366304 TARBP2Q15633 366 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms