RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 OXR1Q8N573 874 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 ZGPATQ8N5A5 531 aaKnown RBP9.38□□□□□ -0.91
YBX3-204ENST00000366290 DDX1Q92499 740 aaKnown RBP9.38□□□□□ -0.91
YBX3-204ENST00000366290 TEPSINQ96N21 525 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 DCTPP1Q9H773 170 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 MBNL3Q9NUK0 354 aaKnown RBP9.38□□□□□ -0.91
YBX3-204ENST00000366290 PPARGC1AQ9UBK2 798 aaKnown RBP9.38□□□□□ -0.91
YBX3-204ENST00000366290 EXOC6BQ9Y2D4 811 aa9.38□□□□□ -0.91
YBX3-204ENST00000366290 RPAP1Q9BWH6 1393 aaPredicted RBP9.37□□□□□ -0.91
YBX3-204ENST00000366290 FITM1A5D6W6 292 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 B4E1Z4 1266 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 HMMRO75330 724 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 IGHDP01880 384 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 SOD2P04179 222 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 PRDX5P30044 214 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 MOB2Q70IA6 237 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 RASAL3Q86YV0 1011 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 ZC3H7AQ8IWR0 971 aaKnown RBP9.37□□□□□ -0.91
YBX3-204ENST00000366290 CHAC2Q8WUX2 184 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 BRINP2Q9C0B6 783 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 TDRD3Q9H7E2 651 aaKnown RBP9.37□□□□□ -0.91
YBX3-204ENST00000366290 CAAP1Q9H8G2 361 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 SAGE1Q9NXZ1 904 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 IMPACTQ9P2X3 320 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 MAPRE3Q9UPY8 281 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 TAF6LQ9Y6J9 622 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 FPGT-TNNI3KV9GXZ4 949 aa9.37□□□□□ -0.91
YBX3-204ENST00000366290 GAKO14976 1311 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 PDE4DIPQ5VU43 2346 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 OTOFQ9HC10 1997 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 NOTOA8MTQ0 251 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 NRDCO43847 1150 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 PPP1R11O60927 126 aaPredicted RBP9.36□□□□□ -0.91
YBX3-204ENST00000366290 RNASE1P07998 156 aaKnown RBP9.36□□□□□ -0.91
YBX3-204ENST00000366290 JMJD7P0C870 316 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 GDNFP39905 211 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 CORO7P57737 925 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 ERVFC1P60507 584 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 RBM10P98175 930 aaKnown RBP9.36□□□□□ -0.91
YBX3-204ENST00000366290 GALNT18Q6P9A2 607 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 ARMC9Q7Z3E5 817 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 RNF180Q86T96 592 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 ERC1Q8IUD2 1116 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 PPM1KQ8N3J5 372 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 PCDH19Q8TAB3 1148 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 ASIC4Q96FT7 647 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 IPPKQ9H8X2 491 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 VEZTQ9HBM0 779 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 PCDH12Q9NPG4 1184 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 CLDND1Q9NY35 253 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 MARCH2Q9P0N8 246 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 HMG20BQ9P0W2 317 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 RWDD3Q9Y3V2 267 aa9.36□□□□□ -0.91
YBX3-204ENST00000366290 UBE2Q2LH0YL09 131 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 HPXP02790 462 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 UQCRFS1P1P0C7P4 283 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 SRGAP2CP0DJJ0 459 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 POU3F2P20265 443 aaPredicted RBP9.35□□□□□ -0.91
YBX3-204ENST00000366290 IBSPP21815 317 aaPredicted RBP9.35□□□□□ -0.91
YBX3-204ENST00000366290 FPR2P25090 351 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 GRK2P25098 689 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 CNGA1P29973 690 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 GRK3P35626 688 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 FLT3P36888 993 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 MCAMP43121 646 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 NEK4P51957 841 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 NR0B2Q15466 257 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 ZNF792Q3KQV3 632 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 HSP90AB4PQ58FF6 505 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 SPTY2D1Q68D10 685 aaPredicted RBP9.35□□□□□ -0.91
YBX3-204ENST00000366290 ZCCHC8Q6NZY4 707 aaKnown RBP9.35□□□□□ -0.91
YBX3-204ENST00000366290 CDC42EP5Q6NZY7 148 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 ABHD17CQ6PCB6 329 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 CEP68Q76N32 757 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 TEX2Q8IWB9 1127 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 SMC5Q8IY18 1101 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 SPATA5Q8NB90 893 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 TMEM169Q96HH4 297 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 NEUROD6Q96NK8 337 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 KRTAP4-12Q9BQ66 201 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 PLCD4Q9BRC7 762 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 TMEM39BQ9GZU3 492 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 CDIP1Q9H305 208 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 SP110Q9HB58 689 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 DBNLQ9UJU6 430 aaKnown RBP9.35□□□□□ -0.91
YBX3-204ENST00000366290 RFX7Q2KHR2 1363 aa9.35□□□□□ -0.91
YBX3-204ENST00000366290 A0A1W2PQ27 194 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 A0A1W2PQ64 194 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 A0A1W2PQC6 194 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 A0A1W2PQD8 194 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 TCP10L2B9ZVM9 353 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 FAM47E-STBD1D6RA91 191 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 H7BY64 318 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 RAB11FIP3O75154 756 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 MAP4K4O95819 1239 aaPredicted RBP9.34□□□□□ -0.91
YBX3-204ENST00000366290 EFEMP2O95967 443 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 ZBTB48P10074 688 aaPredicted RBP9.34□□□□□ -0.91
YBX3-204ENST00000366290 SOX5P35711 763 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 TM4SF4P48230 202 aa9.34□□□□□ -0.91
YBX3-204ENST00000366290 OS9Q13438 667 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms