RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SERPINB2P05120 415 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 CFIP05156 583 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 RBP3P10745 1247 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 COL6A2P12110 1019 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZNF16P17020 682 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 HOXC13P31276 330 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 RBM25P49756 843 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 JAM2P57087 298 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 ACAP1Q15027 740 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 TRIP6Q15654 476 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 DGKDQ16760 1214 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZNF585BQ52M93 769 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 PDCD4Q53EL6 469 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 DRICH1Q6PGQ1 229 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 LRSAM1Q6UWE0 723 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 RSPO2Q6UXX9 243 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZNF782Q6ZMW2 699 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 MAMDC2Q7Z304 686 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 AMIGO2Q86SJ2 522 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 GPR149Q86SP6 731 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 CLEC14AQ86T13 490 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 MSL3Q8N5Y2 521 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 NANOGP1Q8N7R0 232 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 C19orf47Q8N9M1 422 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 OR10H5Q8NGA6 315 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 BTN2A2Q8WVV5 523 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 NKD2Q969F2 451 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 MRGPRX3Q96LB0 322 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 CRBNQ96SW2 442 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 AARSD1Q9BTE6 412 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 CD244Q9BZW8 370 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 PRSS22Q9GZN4 317 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 CDIP1Q9H305 208 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 NCOA5Q9HCD5 579 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 TRMT13Q9NUP7 481 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 KCTD5Q9NXV2 234 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 SELENONQ9NZV5 590 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 BTBD7Q9P203 1132 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 USP36Q9P275 1121 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 DNMT3BQ9UBC3 853 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 PADI4Q9UM07 663 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 SRPK3Q9UPE1 567 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 AFG3L2Q9Y4W6 797 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 NPFFR2Q9Y5X5 522 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 TCF20Q9UGU0 1960 aaKnown RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 COL2A1P02458 1487 aaPredicted RBP0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 MUC5ACP98088 5654 aa0.66□□□□□ -2.3
RNU6-54P-201ENST00000365563 AOX1Q06278 1338 aa0.65□□□□□ -2.3
RNU6-54P-201ENST00000365563 CARNS1A5YM72 827 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 KCNU1A8MYU2 1149 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 FAM47E-STBD1D6RA91 191 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 LEFTY2O00292 366 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 NKRFO15226 690 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 SPRY2O43597 315 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 SOCS5O75159 536 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 STC2O76061 302 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 MPIG6BO95866 241 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 FGBP02675 491 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 TUBB4AP04350 444 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 MPGP29372 298 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 KRT2P35908 639 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 CDKN2AP42771 156 aaKnown RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 KIR2DL3P43628 341 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 XPCQ01831 940 aaPredicted RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 SCAPQ12770 1279 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 RAB33AQ14088 237 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 FAM214AQ32MH5 1076 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 NBPF8Q3BBV2 869 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 SUPT20HL1Q3ZLR7 823 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 CAPRIN2Q6IMN6 1127 aaKnown RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 SLC2A7Q6PXP3 512 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 NR2C2APQ86WQ0 139 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 HIPK4Q8NE63 616 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 OR5AN1Q8NGI8 311 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 OR6P1Q8NGX9 317 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 KLHL6Q8WZ60 621 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 DDX17Q92841 729 aaKnown RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 RNF31Q96EP0 1072 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 IL17RAQ96F46 866 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 VCPIP1Q96JH7 1222 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 FAM84BQ96KN1 310 aaPredicted RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 WDR92Q96MX6 357 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 MEIS3Q99687 375 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 KCNJ15Q99712 375 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 ALG1Q9BT22 464 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 AMNQ9BXJ7 453 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 REXO4Q9GZR2 422 aaKnown RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 SPON1Q9HCB6 807 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 GALNT9Q9HCQ5 603 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 MRS2Q9HD23 443 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 POLR3BQ9NW08 1133 aaPredicted RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 UCKL1Q9NWZ5 548 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 TRNAU1APQ9NX07 287 aaKnown RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 LRP2BPQ9P2M1 347 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 PCDHB10Q9UN67 800 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 ATP11BQ9Y2G3 1177 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 MAP3K2Q9Y2U5 619 aa0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 USP15Q9Y4E8 981 aaPredicted RBP0.65□□□□□ -2.31
RNU6-54P-201ENST00000365563 FAM90A27PA6NNH2 459 aa0.64□□□□□ -2.31
RNU6-54P-201ENST00000365563 H3BNX3 289 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms