RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 VCANP13611 3396 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 CDH23Q9H251 3354 aa22.59■■□□□ 1.21
SHISA4-201ENST00000362011 HNRNPDLO14979 420 aaKnown RBP22.58■■□□□ 1.21
SHISA4-201ENST00000362011 CLIC2O15247 247 aa22.58■■□□□ 1.21
SHISA4-201ENST00000362011 NR3C1P04150 777 aa22.58■■□□□ 1.21
SHISA4-201ENST00000362011 LIG4P49917 911 aa22.58■■□□□ 1.21
SHISA4-201ENST00000362011 MBTD1Q05BQ5 628 aa22.58■■□□□ 1.21
SHISA4-201ENST00000362011 CDKAL1Q5VV42 579 aa22.58■■□□□ 1.21
SHISA4-201ENST00000362011 RPAINQ86UA6 219 aa22.58■■□□□ 1.21
SHISA4-201ENST00000362011 C12orf56Q8IXR9 622 aa22.58■■□□□ 1.21
SHISA4-201ENST00000362011 MRPL4Q9BYD3 311 aaKnown RBP22.58■■□□□ 1.21
SHISA4-201ENST00000362011 TRMT13Q9NUP7 481 aaKnown RBP22.58■■□□□ 1.21
SHISA4-201ENST00000362011 PRMT7Q9NVM4 692 aaPredicted RBP22.58■■□□□ 1.21
SHISA4-201ENST00000362011 KIAA0355O15063 1070 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 CETN3O15182 167 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 ZNF18P17022 549 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 NR2F2P24468 414 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 CDK7P50613 346 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 MRPS6P82932 125 aaKnown RBP22.57■■□□□ 1.2
SHISA4-201ENST00000362011 FAM187BQ17R55 369 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 HSP90AA4PQ58FG1 418 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 ARMCX5Q6P1M9 558 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 LRRC55Q6ZSA7 311 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 CTAGE1Q96RT6 745 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 FZD8Q9H461 694 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 MAGEC2Q9UBF1 373 aaPredicted RBP22.57■■□□□ 1.2
SHISA4-201ENST00000362011 TRPV2Q9Y5S1 764 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 TMEM265A0A087WTH1 108 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 ANKRD63C9JTQ0 380 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 ACKR2O00590 384 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 B4GALT4O60513 344 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 CDK11BP21127 795 aaKnown RBP22.57■■□□□ 1.2
SHISA4-201ENST00000362011 CRYBB1P53674 252 aaPredicted RBP22.57■■□□□ 1.2
SHISA4-201ENST00000362011 SPAG1Q07617 926 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 ADAM9Q13443 819 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 MYBPC2Q14324 1141 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 ZPBP2Q6X784 338 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 FILIP1Q7Z7B0 1213 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 SLC9A9Q8IVB4 645 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 WNT8BQ93098 351 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 PRIMPOLQ96LW4 560 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 OSMRQ99650 979 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 CELF4Q9BZC1 486 aaKnown RBP22.57■■□□□ 1.2
SHISA4-201ENST00000362011 MINDY3Q9H8M7 445 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 GINS2Q9Y248 185 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 CDY2AQ9Y6F7 541 aa22.57■■□□□ 1.2
SHISA4-201ENST00000362011 RALGAPA2Q2PPJ7 1873 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 MROH7Q68CQ1 1323 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 TRIP11Q15643 1979 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 TISP43B9A030 160 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 EDN1P05305 212 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 CLTBP09497 229 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 EPHB4P54760 987 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 PLCB2Q00722 1185 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 PRPF4BQ13523 1007 aaKnown RBP22.56■■□□□ 1.2
SHISA4-201ENST00000362011 SLC39A4Q6P5W5 647 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 ANKRD20A12PQ8NF67 263 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 MAFAQ8NHW3 353 aaPredicted RBP22.56■■□□□ 1.2
SHISA4-201ENST00000362011 CNOT6LQ96LI5 555 aaKnown RBP22.56■■□□□ 1.2
SHISA4-201ENST00000362011 TARS2Q9BW92 718 aaKnown RBP22.56■■□□□ 1.2
SHISA4-201ENST00000362011 CDHR5Q9HBB8 845 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 DMAC2Q9NW81 257 aa22.56■■□□□ 1.2
SHISA4-201ENST00000362011 SPTBN5Q9NRC6 3674 aaKnown RBP22.55■■□□□ 1.2
SHISA4-201ENST00000362011 KCNJ18B7U540 433 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 ERLIN2O94905 339 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 GNA14O95837 355 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 ATP1A3P13637 1013 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 DARSP14868 501 aaKnown RBP22.55■■□□□ 1.2
SHISA4-201ENST00000362011 GARTP22102 1010 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 CYP2J2P51589 502 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 KCNJ12Q14500 433 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 TMEM132AQ24JP5 1023 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 SLFN12LQ6IEE8 588 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 ANKRD33Q7Z3H0 272 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 IRF2BP1Q8IU81 584 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 TMEM174Q8WUU8 243 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 POMGNT1Q8WZA1 660 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 DHX38Q92620 1227 aaKnown RBP22.55■■□□□ 1.2
SHISA4-201ENST00000362011 EEF2KMTQ96G04 330 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 TOX2Q96NM4 488 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 ACO2Q99798 780 aaKnown RBP22.55■■□□□ 1.2
SHISA4-201ENST00000362011 TRPV6Q9H1D0 765 aa22.55■■□□□ 1.2
SHISA4-201ENST00000362011 CNTNAP2Q9UHC6 1331 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 TLR3O15455 904 aaKnown RBP22.54■■□□□ 1.2
SHISA4-201ENST00000362011 CAND2O75155 1236 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 EIF4BP23588 611 aaKnown RBP22.54■■□□□ 1.2
SHISA4-201ENST00000362011 EEF1GP26641 437 aaKnown RBP22.54■■□□□ 1.2
SHISA4-201ENST00000362011 THPOP40225 353 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 MATR3P43243 847 aaKnown RBP eCLIP22.54■■□□□ 1.2
SHISA4-201ENST00000362011 MGAT3Q09327 533 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 PCBP1Q15365 356 aaKnown RBP eCLIP22.54■■□□□ 1.2
SHISA4-201ENST00000362011 AMHR2Q16671 573 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 TRIM71Q2Q1W2 868 aaKnown RBP22.54■■□□□ 1.2
SHISA4-201ENST00000362011 CCDC40Q4G0X9 1142 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 TCP11X2Q5H9J9 407 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 CEP135Q66GS9 1140 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 SARM1Q6SZW1 724 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 FAM126BQ8IXS8 530 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 CBWD1Q9BRT8 395 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 PCIF1Q9H4Z3 704 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms