RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CYP39A1Q9NYL5 469 aa9.89□□□□□ -0.83
CALD1-202ENST00000361901 CSDE1O75534 798 aaKnown RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 RPS6KA5O75582 802 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 ZMYND10O75800 440 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 FTCDO95954 541 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 SSTR3P32745 418 aaPredicted RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 HPDP32754 393 aaPredicted RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 RARRES1P49788 294 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 IRAK1P51617 712 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 EHHADHQ08426 723 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 USP4Q13107 963 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 GJC2Q5T442 439 aaPredicted RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 HIBCHQ6NVY1 386 aaPredicted RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 KCNV1Q6PIU1 500 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 SND1Q7KZF4 910 aaKnown RBP eCLIP9.88□□□□□ -0.83
CALD1-202ENST00000361901 HSD17B14Q9BPX1 270 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 DNAJC12Q9UKB3 198 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 PCDHA13Q9Y5I0 950 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 EMSYQ7Z589 1322 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 A0A1W2PQC6 194 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 BCRP11274 1271 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 ZC3H12AQ5D1E8 599 aaKnown RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 FAM47CQ5HY64 1035 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 KCTD16Q68DU8 428 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 ZNF746Q6NUN9 644 aaPredicted RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 MAATS1Q7Z4T9 603 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 NEK9Q8TD19 979 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 FAM84AQ96KN4 292 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 KDM4CQ9H3R0 1056 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 PNMA3Q9UL41 463 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 SAR1BQ9Y6B6 198 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 ZNF536O15090 1300 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 EPHB6O15197 1021 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 PPFIA2O75334 1257 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 HLTFQ14527 1009 aaKnown RBP eCLIP9.88□□□□□ -0.834e-6■■□□□ 14.4
CALD1-202ENST00000361901 COL24A1Q17RW2 1714 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 CPLX4Q7Z7G2 160 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 TRIM58Q8NG06 486 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 CTNNBL1Q8WYA6 563 aaPredicted RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 APOL6Q9BWW8 343 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 CTTNBP2NLQ9P2B4 639 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 CDC23Q9UJX2 597 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 GRIN3BO60391 1043 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 TFRCP02786 760 aaKnown RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 VSNL1P62760 191 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 PPP2R5CQ13362 524 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 TRPC3Q13507 836 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 ACBD5Q5T8D3 534 aaPredicted RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 VSIG10LQ86VR7 867 aa9.88□□□□□ -0.83
CALD1-202ENST00000361901 POP1Q99575 1024 aaKnown RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 WRAP73Q9P2S5 460 aaPredicted RBP9.88□□□□□ -0.83
CALD1-202ENST00000361901 RREB1Q92766 1687 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 EDIL3O43854 480 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 CREB3O43889 395 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 IQCEQ6IPM2 695 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 ZNF720Q7Z2F6 126 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 LMNTD2Q8IXW0 634 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 COPS5Q92905 334 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 AGPAT3Q9NRZ7 376 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 PLS3P13797 630 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 TCF7P36402 384 aaPredicted RBP9.87□□□□□ -0.83
CALD1-202ENST00000361901 ZNF157P51786 506 aaPredicted RBP9.87□□□□□ -0.83
CALD1-202ENST00000361901 VAMP7P51809 220 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 TFAMQ00059 246 aaKnown RBP9.87□□□□□ -0.83
CALD1-202ENST00000361901 ZNF394Q53GI3 561 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 BEND6Q5SZJ8 279 aaPredicted RBP9.87□□□□□ -0.83
CALD1-202ENST00000361901 ZBTB8OSQ8IWT0 167 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 MCPH1Q8NEM0 835 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 CHST13Q8NET6 341 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 SLC40A1Q9NP59 571 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 GINM1Q9NU53 330 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 HSPBP1Q9NZL4 362 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 SEL1LQ9UBV2 794 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 PACSIN2Q9UNF0 486 aaPredicted RBP9.87□□□□□ -0.83
CALD1-202ENST00000361901 HYOU1Q9Y4L1 999 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 SNCAIPQ9Y6H5 919 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 A6NNZ2 444 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 CEP104O60308 925 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 ABL1P00519 1130 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 CD19P15391 556 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 GGCXP38435 758 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 TMEM62Q0P6H9 643 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 TUBB8Q3ZCM7 444 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 C1orf186Q6ZWK4 172 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 CCDC60Q8IWA6 550 aaPredicted RBP9.87□□□□□ -0.83
CALD1-202ENST00000361901 RNF149Q8NC42 400 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.87□□□□□ -0.83
CALD1-202ENST00000361901 MSTO1Q9BUK6 570 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 TSGA10Q9BZW7 698 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 BTBD7Q9P203 1132 aa9.87□□□□□ -0.83
CALD1-202ENST00000361901 NCK2O43639 380 aa9.86□□□□□ -0.83
CALD1-202ENST00000361901 CDC25CP30307 473 aa9.86□□□□□ -0.83
CALD1-202ENST00000361901 HSD17B4P51659 736 aa9.86□□□□□ -0.83
CALD1-202ENST00000361901 IFFO1Q0D2I5 559 aa9.86□□□□□ -0.83
CALD1-202ENST00000361901 TBX2Q13207 712 aaPredicted RBP9.86□□□□□ -0.83
CALD1-202ENST00000361901 CUL3Q13618 768 aa9.86□□□□□ -0.83
CALD1-202ENST00000361901 DRAP1Q14919 205 aaPredicted RBP9.86□□□□□ -0.83
CALD1-202ENST00000361901 XKR3Q5GH77 459 aa9.86□□□□□ -0.83
CALD1-202ENST00000361901 NAA35Q5VZE5 725 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms