RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 ITPRIPL1Q6GPH6 555 aa14.36□□□□□ -0.11
LDB3-202ENST00000361373 ZNF746Q6NUN9 644 aaPredicted RBP14.36□□□□□ -0.11
LDB3-202ENST00000361373 CCDC197Q8NCU1 140 aa14.36□□□□□ -0.11
LDB3-202ENST00000361373 DDX50Q9BQ39 737 aaKnown RBP14.36□□□□□ -0.11
LDB3-202ENST00000361373 NUP85Q9BW27 656 aa14.36□□□□□ -0.11
LDB3-202ENST00000361373 POLLQ9UGP5 575 aa14.36□□□□□ -0.11
LDB3-202ENST00000361373 ZBBXA8MT70 800 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 P4HA2O15460 535 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 RPLP2P05387 115 aaKnown RBP14.35□□□□□ -0.11
LDB3-202ENST00000361373 RALAP11233 206 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 SLC1A1P43005 524 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 TMED2Q15363 201 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 MMEL1Q495T6 779 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 SAMD7Q7Z3H4 446 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 CHRNA3P32297 505 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 DPYDQ12882 1025 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 SGSM1Q2NKQ1 1148 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 TAF1BQ53T94 588 aaPredicted RBP14.35□□□□□ -0.11
LDB3-202ENST00000361373 KIAA1755Q5JYT7 1200 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 HAUS8Q9BT25 410 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 VCX3AQ9NNX9 186 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 TMEM131LA2VDJ0 1609 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 H3BRJ5 948 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 TRIM49P0CI25 452 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 TRIM49CP0CI26 452 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 CCDC38Q502W7 563 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 JADE1Q6IE81 842 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 FAM83AQ86UY5 434 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 REEP2Q9BRK0 252 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 AP1M1Q9BXS5 423 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 STK33Q9BYT3 514 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 KRT38O76015 456 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 IL1R1P14778 569 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 PRKCEQ02156 737 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 CDKL3Q8IVW4 592 aaPredicted RBP14.35□□□□□ -0.11
LDB3-202ENST00000361373 SCG3Q8WXD2 468 aaKnown RBP14.35□□□□□ -0.11
LDB3-202ENST00000361373 PARD6BQ9BYG5 372 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 POLIQ9UNA4 740 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 CDK17Q00537 523 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 DGKDQ16760 1214 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 PASD1Q8IV76 773 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 DEPDC1BQ8WUY9 529 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 ATG4CQ96DT6 458 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 GMCL1Q96IK5 515 aa14.35□□□□□ -0.11
LDB3-202ENST00000361373 TNS2Q63HR2 1409 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 IGSF9BQ9UPX0 1349 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 RARBP10826 455 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 CPT1AP50416 773 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 MCUQ8NE86 351 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 GDAP1Q8TB36 358 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 VWDEQ8N2E2 1590 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 SSU72P8A0A1W2PR75 194 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 FOXP2O15409 715 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 MROH8Q9H579 483 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 TUBE1Q9UJT0 475 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 ADGRG1Q9Y653 693 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 FAM187AA6NFU0 413 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 RTN2O75298 545 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 BCAR1P56945 870 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 KCNB2Q92953 911 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 AGPAT1Q99943 283 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 FARP1Q9Y4F1 1045 aaPredicted RBP14.34□□□□□ -0.11
LDB3-202ENST00000361373 CHEK2O96017 543 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 CPB1P15086 417 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 GFPT1Q06210 699 aaPredicted RBP14.34□□□□□ -0.11
LDB3-202ENST00000361373 RAD51Q06609 339 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 LLGL1Q15334 1064 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 ATG16L1Q676U5 607 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 POLD4Q9HCU8 107 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 UVRAGQ9P2Y5 699 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 APEX2Q9UBZ4 518 aa14.34□□□□□ -0.11
LDB3-202ENST00000361373 ITIH6Q6UXX5 1313 aa14.33□□□□□ -0.11
LDB3-202ENST00000361373 SERPINB6P35237 376 aa14.33□□□□□ -0.11
LDB3-202ENST00000361373 TMEM132DQ14C87 1099 aa14.33□□□□□ -0.11
LDB3-202ENST00000361373 WDR72Q3MJ13 1102 aa14.33□□□□□ -0.11
LDB3-202ENST00000361373 FAM102AQ5T9C2 384 aaPredicted RBP14.33□□□□□ -0.11
LDB3-202ENST00000361373 BTBD8Q5XKL5 378 aa14.33□□□□□ -0.11
LDB3-202ENST00000361373 SPOPLQ6IQ16 392 aa14.33□□□□□ -0.11
LDB3-202ENST00000361373 KCNH7Q9NS40 1196 aa14.33□□□□□ -0.11
LDB3-202ENST00000361373 FAN1Q9Y2M0 1017 aa14.33□□□□□ -0.11
LDB3-202ENST00000361373 BCL9O00512 1426 aa14.33□□□□□ -0.12
LDB3-202ENST00000361373 TSTA3Q13630 321 aaPredicted RBP14.33□□□□□ -0.12
LDB3-202ENST00000361373 KCTD16Q68DU8 428 aa14.33□□□□□ -0.12
LDB3-202ENST00000361373 PRMT6Q96LA8 375 aaPredicted RBP14.33□□□□□ -0.12
LDB3-202ENST00000361373 GPBP1L1Q9HC44 474 aaPredicted RBP14.33□□□□□ -0.12
LDB3-202ENST00000361373 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.12
LDB3-202ENST00000361373 CELF2O95319 508 aaKnown RBP14.33□□□□□ -0.12
LDB3-202ENST00000361373 TAC1P20366 129 aa14.33□□□□□ -0.12
LDB3-202ENST00000361373 RPS6P62753 249 aaKnown RBP14.33□□□□□ -0.12
LDB3-202ENST00000361373 TRIP13Q15645 432 aaPredicted RBP14.33□□□□□ -0.12
LDB3-202ENST00000361373 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.33□□□□□ -0.12
LDB3-202ENST00000361373 CEP120Q8N960 986 aa14.33□□□□□ -0.12
LDB3-202ENST00000361373 GMCL1P1Q8NEA9 526 aa14.33□□□□□ -0.12
LDB3-202ENST00000361373 KAZALD1Q96I82 304 aa14.33□□□□□ -0.12
LDB3-202ENST00000361373 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.33□□□□□ -0.12
LDB3-202ENST00000361373 FSD1LQ9BXM9 530 aa14.33□□□□□ -0.12
LDB3-202ENST00000361373 FAM205AQ6ZU69 1335 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms