RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 USP20Q9Y2K6 914 aa13.61□□□□□ -0.23
NIF3L1-201ENST00000359683 ZMYM2Q9UBW7 1377 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 CNTNAP2Q9UHC6 1331 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 A0A1B0GUA9 196 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 ANKRD63C9JTQ0 380 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 PDXKO00764 312 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 PSMA7O14818 248 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 ERLIN2O94905 339 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 CD52P31358 61 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 RFC2P35250 354 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 ZNF445P59923 1031 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 NCBP1Q09161 790 aaKnown RBP13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 PLEKHG4Q58EX7 1191 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 MFSD5Q6N075 450 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 SYCP3Q8IZU3 236 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 VWCEQ96DN2 955 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 GBP3Q9H0R5 595 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 IKZF4Q9H2S9 585 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 PTPRHQ9HD43 1115 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 CHST12Q9NRB3 414 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 AGPAT5Q9NUQ2 364 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 DACH1Q9UI36 760 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 TRAF3IP3Q9Y228 551 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 TNFSF13BQ9Y275 285 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 STYXL1Q9Y6J8 313 aa13.6□□□□□ -0.23
NIF3L1-201ENST00000359683 PROZP22891 400 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 CCNE1P24864 410 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 ERCC5P28715 1186 aaPredicted RBP13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 PAK2Q13177 524 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 ZCWPW2Q504Y3 356 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 ATF7IP2Q5U623 682 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 SLC39A4Q6P5W5 647 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 FOXR2Q6PJQ5 311 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 P2RX5Q93086 422 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 ANP32EQ9BTT0 268 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 TMX1Q9H3N1 280 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 TYW1Q9NV66 732 aaKnown RBP13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 CGNQ9P2M7 1197 aaKnown RBP13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 PRKAG2Q9UGJ0 569 aa13.59□□□□□ -0.23
NIF3L1-201ENST00000359683 RBAK-RBAKDNI3L0D1 243 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 ABLIM1O14639 778 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 HNRNPDLO14979 420 aaKnown RBP13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 TOM1L1O75674 476 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 ADSSP30520 456 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 LIG4P49917 911 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 DSC3Q14574 896 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 ANKRD40Q6AI12 368 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 SLFN12LQ6IEE8 588 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 KLHL10Q6JEL2 608 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 C12orf56Q8IXR9 622 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 TDHQ8IZJ6 230 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 TMEM199Q8N511 208 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 DBF4BQ8NFT6 615 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 GOLGA5Q8TBA6 731 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 TMEM174Q8WUU8 243 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 NELFBQ8WX92 580 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 BICD1Q96G01 975 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 CPB2Q96IY4 423 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 MED15Q96RN5 788 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 IFIH1Q9BYX4 1025 aaKnown RBP13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 RWDD2AQ9UIY3 292 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 TANC1Q9C0D5 1861 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 TET1Q8NFU7 2136 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 SCN5AQ14524 2016 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 LAMA3Q16787 3333 aa13.58□□□□□ -0.24
NIF3L1-201ENST00000359683 TISP43B9A030 160 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 HAX1O00165 279 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 N4BP3O15049 544 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 PMS1P54277 932 aaKnown RBP13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 LRRC63Q05C16 580 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 PAK1Q13153 545 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 MYBPC2Q14324 1141 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 NFIL3Q16649 462 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 ANO6Q4KMQ2 910 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 EEF1DP3Q658K8 133 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 NOTUMQ6P988 496 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 C11orf57Q6ZUT1 292 aaPredicted RBP13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 HS2ST1Q7LGA3 356 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 SEPT8Q92599 483 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 APBB2Q92870 758 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 CCDC51Q96ER9 411 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 UBE2OQ9C0C9 1292 aaKnown RBP13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 HAPLN2Q9GZV7 340 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 DNAJC25Q9H1X3 360 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 PDZD7Q9H5P4 517 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 AGPAT3Q9NRZ7 376 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 DMAC2Q9NW81 257 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 CTNND2Q9UQB3 1225 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 PIN4Q9Y237 131 aaKnown RBP13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 A0A0B4J269 797 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 BICDL2A1A5D9 508 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 CLDN3O15551 220 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 CALUO43852 315 aaPredicted RBP13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 CSF2RAP15509 400 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 GARTP22102 1010 aa13.57□□□□□ -0.24
NIF3L1-201ENST00000359683 MCL1Q07820 350 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms