RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 POF1BQ8WVV4 589 aa18.77■□□□□ 0.6
FAM3D-201ENST00000358781 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
FAM3D-201ENST00000358781 NXF3Q9H4D5 531 aaKnown RBP18.77■□□□□ 0.6
FAM3D-201ENST00000358781 PDZD7Q9H5P4 517 aa18.77■□□□□ 0.6
FAM3D-201ENST00000358781 NSUN3Q9H649 340 aaKnown RBP18.77■□□□□ 0.6
FAM3D-201ENST00000358781 KMT5AQ9NQR1 393 aa18.77■□□□□ 0.6
FAM3D-201ENST00000358781 ARHGAP28Q9P2N2 729 aa18.77■□□□□ 0.6
FAM3D-201ENST00000358781 USP20Q9Y2K6 914 aa18.77■□□□□ 0.6
FAM3D-201ENST00000358781 RBM19Q9Y4C8 960 aaKnown RBP18.77■□□□□ 0.6
FAM3D-201ENST00000358781 HES2Q9Y543 173 aa18.77■□□□□ 0.6
FAM3D-201ENST00000358781 K7ERI5 159 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 SPTLC2O15270 562 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 YEATS4O95619 227 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 PLS3P13797 630 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 PPM1AP35813 382 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 TXLNAP40222 546 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 PBX3P40426 434 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 BCAR1P56945 870 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 DHX8Q14562 1220 aaKnown RBP18.76■□□□□ 0.59
FAM3D-201ENST00000358781 TMEM132AQ24JP5 1023 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 TCEAL5Q5H9L2 206 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 NT5DC1Q5TFE4 455 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 HACE1Q8IYU2 909 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 SPIRE2Q8WWL2 714 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 LARP4BQ92615 738 aaKnown RBP18.76■□□□□ 0.59
FAM3D-201ENST00000358781 NTPCRQ9BSD7 190 aaKnown RBP18.76■□□□□ 0.59
FAM3D-201ENST00000358781 TMEM134Q9H6X4 195 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 SPG21Q9NZD8 308 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 KANSL3Q9P2N6 904 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 CCDC39Q9UFE4 941 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 COG5Q9UP83 839 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 PHLPP2Q6ZVD8 1323 aa18.76■□□□□ 0.59
FAM3D-201ENST00000358781 INPPL1O15357 1258 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 SLC16A4O15374 487 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 PPP6R2O75170 966 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 CSPG5O95196 566 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 DDIT3P35638 169 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 AFF1P51825 1210 aaKnown RBP18.75■□□□□ 0.59
FAM3D-201ENST00000358781 PLCB3Q01970 1234 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 RNASELQ05823 741 aaKnown RBP18.75■□□□□ 0.59
FAM3D-201ENST00000358781 FOXD4L6Q3SYB3 417 aaPredicted RBP18.75■□□□□ 0.59
FAM3D-201ENST00000358781 FOXD4L3Q6VB84 417 aaPredicted RBP18.75■□□□□ 0.59
FAM3D-201ENST00000358781 ATXN2LQ8WWM7 1075 aaKnown RBP18.75■□□□□ 0.59
FAM3D-201ENST00000358781 REEP2Q9BRK0 252 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 APOL6Q9BWW8 343 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 NRDE2Q9H7Z3 1164 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 STK17AQ9UEE5 414 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 KCNG1Q9UIX4 513 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 ODF2LQ9ULJ1 636 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 LZTS1Q9Y250 596 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 GIT1Q9Y2X7 761 aa18.75■□□□□ 0.59
FAM3D-201ENST00000358781 CARNS1A5YM72 827 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 ARL5CA6NH57 179 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 ZC3H11AO75152 810 aaKnown RBP eCLIP18.74■□□□□ 0.59
FAM3D-201ENST00000358781 ALDH7A1P49419 539 aaKnown RBP18.74■□□□□ 0.59
FAM3D-201ENST00000358781 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
FAM3D-201ENST00000358781 RRAGBQ5VZM2 374 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 EEF1DP3Q658K8 133 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 ATL3Q6DD88 541 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 TAS1R3Q7RTX0 852 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 SLC39A11Q8N1S5 342 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 MRPS27Q92552 414 aaKnown RBP18.74■□□□□ 0.59
FAM3D-201ENST00000358781 HLA-CQ95604 372 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 GAD1Q99259 594 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 ADPGKQ9BRR6 497 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 DAXXQ9UER7 740 aaPredicted RBP18.74■□□□□ 0.59
FAM3D-201ENST00000358781 ZMYM2Q9UBW7 1377 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 B4GALT3O60512 393 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 AKAP5P24588 427 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 IRS1P35568 1242 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 MLH1P40692 756 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 SMTNP53814 917 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 MRPS5P82675 430 aaKnown RBP18.74■□□□□ 0.59
FAM3D-201ENST00000358781 KRT17Q04695 432 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 GIT2Q14161 759 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 BECN1Q14457 450 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 ATF7IP2Q5U623 682 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 ZNF280BQ86YH2 543 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 TMEM161BQ8NDZ6 487 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 GBP3Q9H0R5 595 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 TLR9Q9NR96 1032 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 LARSQ9P2J5 1176 aaKnown RBP18.74■□□□□ 0.59
FAM3D-201ENST00000358781 DNAJB4Q9UDY4 337 aa18.74■□□□□ 0.59
FAM3D-201ENST00000358781 PUF60Q9UHX1 559 aaKnown RBP18.74■□□□□ 0.59
FAM3D-201ENST00000358781 TDRD15B5MCY1 1934 aaKnown RBP18.73■□□□□ 0.59
FAM3D-201ENST00000358781 NT5C1B-RDH14C9J2C7 533 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 DDHD2O94830 711 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 FAM13AO94988 1023 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 BRD1O95696 1058 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 POMCP01189 267 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 KRT18P05783 430 aaKnown RBP18.73■□□□□ 0.59
FAM3D-201ENST00000358781 GALTP07902 379 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 ZNF131P52739 623 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 TFF2Q03403 129 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 COL19A1Q14993 1142 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 DCAF4L1Q3SXM0 396 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 CCDC73Q6ZRK6 1079 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 ZFP42Q96MM3 310 aa18.73■□□□□ 0.59
FAM3D-201ENST00000358781 ACO2Q99798 780 aaKnown RBP18.73■□□□□ 0.59
FAM3D-201ENST00000358781 MRPL4Q9BYD3 311 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms