RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 IFT122Q9HBG6 1241 aa17.78■□□□□ 0.44
IFT20-202ENST00000357896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.78■□□□□ 0.44
IFT20-202ENST00000357896 FAM217BQ9NTX9 383 aaPredicted RBP17.78■□□□□ 0.44
IFT20-202ENST00000357896 PRG3Q9Y2Y8 225 aaPredicted RBP17.78■□□□□ 0.44
IFT20-202ENST00000357896 FANCMQ8IYD8 2048 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 ACACBO00763 2458 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 CDC27P30260 824 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 MAGEA9P43362 315 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 EXOSC10Q01780 885 aaKnown RBP17.77■□□□□ 0.44
IFT20-202ENST00000357896 PRKCQQ04759 706 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 DHX32Q7L7V1 743 aaKnown RBP17.77■□□□□ 0.44
IFT20-202ENST00000357896 MIER3Q7Z3K6 550 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 PALB2Q86YC2 1186 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 KSR1Q8IVT5 923 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 COLGALT2Q8IYK4 626 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 GPR65Q8IYL9 337 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 RNF168Q8IYW5 571 aaPredicted RBP17.77■□□□□ 0.44
IFT20-202ENST00000357896 CHST7Q9NS84 486 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 MARCH5Q9NX47 278 aa17.77■□□□□ 0.44
IFT20-202ENST00000357896 CDV3Q9UKY7 258 aaKnown RBP17.77■□□□□ 0.44
IFT20-202ENST00000357896 KLF18A0A0U1RQI7 1052 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 DDX11L8A8MPP1 907 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 TGM5O43548 720 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 STBD1O95210 358 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 EFEMP2O95967 443 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 NCLP19338 710 aaKnown RBP17.76■□□□□ 0.43
IFT20-202ENST00000357896 FSHRP23945 695 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 GPC5P78333 572 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 CREMQ03060 361 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 SRGAP1Q7Z6B7 1085 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 EXOC8Q8IYI6 725 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 SH2D3AQ9BRG2 576 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 DDX23Q9BUQ8 820 aaKnown RBP17.76■□□□□ 0.43
IFT20-202ENST00000357896 COLEC11Q9BWP8 271 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 COL4A3BPQ9Y5P4 624 aa17.76■□□□□ 0.43
IFT20-202ENST00000357896 TMEM150BA6NC51 233 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 ADAMTS3O15072 1205 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 LRRN2O75325 713 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 PSMD10O75832 226 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 ITGA4P13612 1032 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 HOXA11P31270 313 aaPredicted RBP17.75■□□□□ 0.43
IFT20-202ENST00000357896 ADD1P35611 737 aaKnown RBP17.75■□□□□ 0.43
IFT20-202ENST00000357896 PFKPQ01813 784 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 CSTF1Q05048 431 aaKnown RBP17.75■□□□□ 0.43
IFT20-202ENST00000357896 SNW1Q13573 536 aaKnown RBP17.75■□□□□ 0.43
IFT20-202ENST00000357896 RSPO2Q6UXX9 243 aaPredicted RBP17.75■□□□□ 0.43
IFT20-202ENST00000357896 MTSS1LQ765P7 747 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 SLC7A3Q8WY07 619 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 RTKNQ9BST9 563 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 ANO2Q9NQ90 1003 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 ZSCAN32Q9NX65 697 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 FNIP2Q9P278 1114 aa17.75■□□□□ 0.43
IFT20-202ENST00000357896 NAP1L2Q9ULW6 460 aaPredicted RBP17.75■□□□□ 0.43
IFT20-202ENST00000357896 GPR179Q6PRD1 2367 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 CACNA1IQ9P0X4 2223 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 ZMYND10O75800 440 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 DSC1Q08554 894 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 UBXN2BQ14CS0 331 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 MLF2Q15773 248 aaPredicted RBP17.74■□□□□ 0.43
IFT20-202ENST00000357896 USP41Q3LFD5 358 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 SLC44A4Q53GD3 710 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 UBXN11Q5T124 520 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 LILRA6Q6PI73 481 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 ZBTB44Q8NCP5 570 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 CCDC148Q8NFR7 591 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 ESYT1Q9BSJ8 1104 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 CDH7Q9ULB5 785 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 WDR81Q562E7 1941 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 ZFHX4Q86UP3 3567 aa17.74■□□□□ 0.43
IFT20-202ENST00000357896 ARL5CA6NH57 179 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 FAM170BA6NMN3 283 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 PRPF3O43395 683 aaKnown RBP17.73■□□□□ 0.43
IFT20-202ENST00000357896 TBC1D4O60343 1298 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 SRGAP2CP0DJJ0 459 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 PSMC5P62195 406 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 AKAP17AQ02040 695 aaKnown RBP17.73■□□□□ 0.43
IFT20-202ENST00000357896 NCBP1Q09161 790 aaKnown RBP17.73■□□□□ 0.43
IFT20-202ENST00000357896 PCBP1Q15365 356 aaKnown RBP eCLIP17.73■□□□□ 0.43
IFT20-202ENST00000357896 Q4G0T1 1027 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 PARM1Q6UWI2 310 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 ANO5Q75V66 913 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 PRPF31Q8WWY3 499 aaKnown RBP17.73■□□□□ 0.43
IFT20-202ENST00000357896 FGF14Q92915 247 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 TCEANC2Q96MN5 208 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 NELL2Q99435 816 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 RPP25Q9BUL9 199 aaKnown RBP17.73■□□□□ 0.43
IFT20-202ENST00000357896 EPC1Q9H2F5 836 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 SMG5Q9UPR3 1016 aaKnown RBP17.73■□□□□ 0.43
IFT20-202ENST00000357896 DOCK8Q8NF50 2099 aa17.73■□□□□ 0.43
IFT20-202ENST00000357896 NCAM2O15394 837 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 FGD1P98174 961 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 ST3GAL2Q16842 350 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 ZBTB41Q5SVQ8 909 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 B3GNT9Q6UX72 402 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 SMG8Q8ND04 991 aaKnown RBP17.72■□□□□ 0.43
IFT20-202ENST00000357896 ST13P5Q8NFI4 369 aaPredicted RBP17.72■□□□□ 0.43
IFT20-202ENST00000357896 PSPC1Q8WXF1 523 aaKnown RBP17.72■□□□□ 0.43
IFT20-202ENST00000357896 GJA10Q969M2 543 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 MBOAT7Q96N66 472 aa17.72■□□□□ 0.43
IFT20-202ENST00000357896 GAD1Q99259 594 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms