RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GDF11O95390 407 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 EZRP15311 586 aaKnown RBP19.05■□□□□ 0.64
RTN4-204ENST00000357732 RIPK1Q13546 671 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 COG2Q14746 738 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 MSL1Q68DK7 614 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 WDR18Q9BV38 432 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 AZI2Q9H6S1 392 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 HOMER3Q9NSC5 361 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 TMOD4Q9NZQ9 345 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 COL2A1P02458 1487 aaPredicted RBP19.05■□□□□ 0.64
RTN4-204ENST00000357732 RASGRF2O14827 1237 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 GAS7O60861 476 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 POLD1P28340 1107 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 PDE6CP51160 858 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 PDE4CQ08493 712 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 PALB2Q86YC2 1186 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 SYCP3Q8IZU3 236 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 GIMAP7Q8NHV1 300 aa19.05■□□□□ 0.64
RTN4-204ENST00000357732 HOXA13P31271 388 aaPredicted RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 COILP38432 576 aaPredicted RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 EPC2Q52LR7 807 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 CRELD2Q6UXH1 353 aaPredicted RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 PODNQ7Z5L7 613 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 GBP7Q8N8V2 638 aaPredicted RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 PLCD4Q9BRC7 762 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 LRRC4CQ9HCJ2 640 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 UBE2TQ9NPD8 197 aaPredicted RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 UVRAGQ9P2Y5 699 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 NRXN2Q9P2S2 1712 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 RBM5P52756 815 aaKnown RBP eCLIP19.04■□□□□ 0.64
RTN4-204ENST00000357732 SLC27A3Q5K4L6 730 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 B3GNT9Q6UX72 402 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 SYDE1Q6ZW31 735 aaPredicted RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 ADAT2Q7Z6V5 191 aaKnown RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 SLC13A5Q86YT5 568 aaPredicted RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 SEMA4AQ9H3S1 761 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 LRRC19Q9H756 370 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 WHRNQ9P202 907 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 TPX2Q9ULW0 747 aaKnown RBP19.04■□□□□ 0.64
RTN4-204ENST00000357732 ATRNL1Q5VV63 1379 aa19.04■□□□□ 0.64
RTN4-204ENST00000357732 NPR1P16066 1061 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 COMTP21964 271 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 MAN1A1P33908 653 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 VAMP7P51809 220 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 ZNF568Q3ZCX4 644 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 CCHCR1Q8TD31 782 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 KRT35Q92764 455 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 SERPINB12Q96P63 405 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 LARSQ9P2J5 1176 aaKnown RBP19.03■□□□□ 0.64
RTN4-204ENST00000357732 PRR12Q9ULL5 1215 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 ANKRD31Q8N7Z5 1873 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 AFF2P51816 1311 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 TLDC2A0PJX2 215 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 LRRN2O75325 713 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 POLR2MP0CAP2 368 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 NF2P35240 595 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 COPB2P35606 906 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 CALCOCO2Q13137 446 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 CEP55Q53EZ4 464 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 TTC27Q6P3X3 843 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 TRPM8Q7Z2W7 1104 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 RPUSD2Q8IZ73 545 aaKnown RBP19.03■□□□□ 0.64
RTN4-204ENST00000357732 HOOK2Q96ED9 719 aa19.03■□□□□ 0.64
RTN4-204ENST00000357732 MYH11P35749 1972 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 EMSYQ7Z589 1322 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 ARHGEF35A5YM69 484 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 CYP1A2P05177 515 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 AUHQ13825 339 aaKnown RBP19.02■□□□□ 0.64
RTN4-204ENST00000357732 SLC30A10Q6XR72 485 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 CCDC105Q8IYK2 499 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 LRRC34Q8IZ02 419 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 SLC20A1Q8WUM9 679 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 MAIP1Q8WWC4 291 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 RIT2Q99578 217 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 IKZF4Q9H2S9 585 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.02■□□□□ 0.64
RTN4-204ENST00000357732 GTF3C4Q9UKN8 822 aa19.02■□□□□ 0.64
RTN4-204ENST00000357732 BACH1O14867 736 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 ONECUT3O60422 494 aaPredicted RBP19.01■□□□□ 0.63
RTN4-204ENST00000357732 ECEL1O95672 775 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 STAT2P52630 851 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 JAG1P78504 1218 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 ELF3P78545 371 aaPredicted RBP19.01■□□□□ 0.63
RTN4-204ENST00000357732 CNGA2Q16280 664 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 FAM71AQ8IYT1 594 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 EPS8L1Q8TE68 723 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 TEKT3Q9BXF9 490 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 ST6GALNAC4Q9H4F1 302 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 ATP6V0A4Q9HBG4 840 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 VIL1P09327 827 aaKnown RBP19.01■□□□□ 0.63
RTN4-204ENST00000357732 RWDD2BP57060 319 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 IFI35P80217 286 aaPredicted RBP19.01■□□□□ 0.63
RTN4-204ENST00000357732 CAV1Q03135 178 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 RBM26Q5T8P6 1007 aaKnown RBP19.01■□□□□ 0.63
RTN4-204ENST00000357732 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
RTN4-204ENST00000357732 FAM228AQ86W67 206 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 CCDC63Q8NA47 563 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 ACCSQ96QU6 501 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 IWS1Q96ST2 819 aa19.01■□□□□ 0.63
RTN4-204ENST00000357732 PRMT1Q99873 361 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms