RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MRPL4Q9BYD3 311 aaKnown RBP19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 CDHR5Q9HBB8 845 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 ACKR2O00590 384 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 B4GALT5O43286 388 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 ADRB2P07550 413 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 HSPA8P11142 646 aaKnown RBP19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 MTFR1Q15390 333 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 AMHR2Q16671 573 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 KIZQ2M2Z5 673 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 ZNF410Q86VK4 478 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 SESTD1Q86VW0 696 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 SLC35C1Q96A29 364 aa19.81■□□□□ 0.76
SMARCD3-202ENST00000356800 ABLIM1O14639 778 aa19.8■□□□□ 0.76
SMARCD3-202ENST00000356800 KCNH2Q12809 1159 aa19.8■□□□□ 0.76
SMARCD3-202ENST00000356800 FAM187BQ17R55 369 aa19.8■□□□□ 0.76
SMARCD3-202ENST00000356800 SLC9C1Q4G0N8 1177 aa19.8■□□□□ 0.76
SMARCD3-202ENST00000356800 CBWD2Q8IUF1 395 aa19.8■□□□□ 0.76
SMARCD3-202ENST00000356800 CCDC155Q8N6L0 562 aa19.8■□□□□ 0.76
SMARCD3-202ENST00000356800 TSEN34Q9BSV6 310 aaKnown RBP19.8■□□□□ 0.76
SMARCD3-202ENST00000356800 PAK6Q9NQU5 681 aaPredicted RBP19.8■□□□□ 0.76
SMARCD3-202ENST00000356800 A0A0B4J269 797 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 MOXD2PA6NHM9 499 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 MAPK13O15264 365 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 CABYRO75952 493 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 SFPQP23246 707 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 ARID5BQ14865 1188 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 FAM47CQ5HY64 1035 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 PLEKHO2Q8TD55 490 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 ERGIC2Q96RQ1 377 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 PRMT7Q9NVM4 692 aaPredicted RBP19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 ANKFY1Q9P2R3 1169 aa19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.79■□□□□ 0.76
SMARCD3-202ENST00000356800 TOM1L1O75674 476 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 MYCP01106 439 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 PROZP22891 400 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 MSNP26038 577 aaKnown RBP19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 KLK7P49862 253 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 MCCD1P59942 119 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 LRMPQ12912 555 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 PRPF4BQ13523 1007 aaKnown RBP19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 SYCP1Q15431 976 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 SNRNP35Q16560 246 aaKnown RBP19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 DCAF17Q5H9S7 520 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 SLFN12LQ6IEE8 588 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 TSHZ1Q6ZSZ6 1077 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 GPD1LQ8N335 351 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 WNT8BQ93098 351 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 SCLT1Q96NL6 688 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 PTPRHQ9HD43 1115 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 AGO2Q9UKV8 859 aaKnown RBP19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 RBAK-RBAKDNI3L0D1 243 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 TRIM49P0CI25 452 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 TRIM49CP0CI26 452 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 CDC42EP1Q00587 391 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 PPP2R3AQ06190 1150 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 BFSP1Q12934 665 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 ITGA7Q13683 1181 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 TRIM14Q14142 442 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 ZBTB41Q5SVQ8 909 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 FKBP15Q5T1M5 1219 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 EEF1DP3Q658K8 133 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 TAF2Q6P1X5 1199 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 CRELD2Q6UXH1 353 aaPredicted RBP19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 SRGAP1Q7Z6B7 1085 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 SERINC5Q86VE9 423 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 ARRDC4Q8NCT1 418 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 FAM213AQ9BRX8 229 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 SIK3Q9Y2K2 1263 aa19.78■□□□□ 0.76
SMARCD3-202ENST00000356800 CNTNAP2Q9UHC6 1331 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 A0A1W2PQ45 241 aaPredicted RBP19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 A0A1W2PQY0 241 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 EXTL3O43909 919 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 FAM189A1O60320 539 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 AFPP02771 609 aaKnown RBP19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 CCL5P13501 91 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 DLG4P78352 724 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 GOLGA8FQ08AF8 430 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 GOLGA8DPQ0D2H9 430 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 C1orf220Q5T0J3 134 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 ATF7IP2Q5U623 682 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 TCERG1LQ5VWI1 586 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 INTS8Q75QN2 995 aaKnown RBP19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 NME8Q8N427 588 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 VTI1AQ96AJ9 217 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 MFSD14AQ96MC6 490 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 OSMRQ99650 979 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 MSTO1Q9BUK6 570 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 GINS2Q9Y248 185 aa19.77■□□□□ 0.76
SMARCD3-202ENST00000356800 KIAA0391O15091 583 aaKnown RBP19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 CLDN3O15551 220 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 TSPAN1O60635 241 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 FGFR4P22455 802 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 MCL1Q07820 350 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 CYP24A1Q07973 514 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 KCNMA1Q12791 1236 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 CTU1Q7Z7A3 348 aaKnown RBP19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 ZBTB33Q86T24 672 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 PPFIBP1Q86W92 1011 aa19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 CDR2LQ86X02 465 aaPredicted RBP19.76■□□□□ 0.75
SMARCD3-202ENST00000356800 PRIMPOLQ96LW4 560 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms