RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 SEPT12Q8IYM1 358 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 PARD3BQ8TEW8 1205 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 ATG4AQ8WYN0 398 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 CFAP69A5D8W1 941 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 MYH6P13533 1939 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 CASP5P51878 434 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 INTS2Q9H0H0 1204 aaKnown RBP13.41□□□□□ -0.26
BDNF-202ENST00000356660 SAYSD1Q9NPB0 183 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.41□□□□□ -0.26
BDNF-202ENST00000356660 DIS3Q9Y2L1 958 aaKnown RBP13.41□□□□□ -0.26
BDNF-202ENST00000356660 C21orf2O43822 256 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 OPHN1O60890 802 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 SKIP12755 728 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 GPATCH4Q5T3I0 446 aaKnown RBP13.41□□□□□ -0.26
BDNF-202ENST00000356660 SLC30A10Q6XR72 485 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 SLC30A5Q8TAD4 765 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 KIFAP3Q92845 792 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
BDNF-202ENST00000356660 HAUS1Q96CS2 278 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 ARHGEF26Q96DR7 871 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 NUP85Q9BW27 656 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 CDC42EP4Q9H3Q1 356 aaKnown RBP13.41□□□□□ -0.26
BDNF-202ENST00000356660 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 ANAPC7Q9UJX3 599 aa13.41□□□□□ -0.26
BDNF-202ENST00000356660 MGRN1O60291 552 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 KRT19P08727 400 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 POLR2MP0CAP2 368 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 GNAT1P11488 350 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 KLC1Q07866 573 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 ASTE1Q2TB18 679 aaPredicted RBP13.4□□□□□ -0.26
BDNF-202ENST00000356660 LRRC23Q53EV4 343 aaPredicted RBP13.4□□□□□ -0.26
BDNF-202ENST00000356660 CFAP157Q5JU67 520 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 ARL10Q8N8L6 244 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 NEDD1Q8NHV4 660 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 ZNF564Q8TBZ8 553 aaPredicted RBP13.4□□□□□ -0.26
BDNF-202ENST00000356660 TEKT4Q8WW24 435 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 KRT35Q92764 455 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 RMI1Q9H9A7 625 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 ERVK-5Q9HDB9 667 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 ZFP69BQ9UJL9 534 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 NALCNQ8IZF0 1738 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 GOLGA8SH3BPF8 625 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 GOLGA8MH3BSY2 632 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 PSMC6P62333 389 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 RNASELQ05823 741 aaKnown RBP13.4□□□□□ -0.26
BDNF-202ENST00000356660 EDRF1Q3B7T1 1238 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 WLSQ5T9L3 541 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 POP1Q99575 1024 aaKnown RBP13.4□□□□□ -0.26
BDNF-202ENST00000356660 PAGR1Q9BTK6 254 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 LARSQ9P2J5 1176 aaKnown RBP13.4□□□□□ -0.26
BDNF-202ENST00000356660 NFAT5O94916 1531 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 MED24O75448 989 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 CIB2O75838 187 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 TMEM253P0C7T8 217 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 KCNA1Q09470 495 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 SPARCL1Q14515 664 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 IRF2BP2Q7Z5L9 587 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 SH2D3AQ9BRG2 576 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 PARVGQ9HBI0 331 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 NARFQ9UHQ1 456 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 AGAP1Q9UPQ3 857 aa13.4□□□□□ -0.26
BDNF-202ENST00000356660 C1orf167Q5SNV9 1468 aa13.4□□□□□ -0.27
BDNF-202ENST00000356660 GOLGA8RI6L899 631 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 GYG2O15488 501 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 NCALDP61601 193 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 ECM1Q16610 540 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 RILPQ96NA2 401 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
BDNF-202ENST00000356660 CCPG1Q9ULG6 757 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 RGPD2P0DJD1 1756 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 KDM3BQ7LBC6 1761 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 SRRM3A6NNA2 597 aaPredicted RBP13.39□□□□□ -0.27
BDNF-202ENST00000356660 FOXN3O00409 490 aaPredicted RBP13.39□□□□□ -0.27
BDNF-202ENST00000356660 NOP56O00567 594 aaKnown RBP13.39□□□□□ -0.27
BDNF-202ENST00000356660 PDXKO00764 312 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 RIPK2O43353 540 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 ZBED4O75132 1171 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 AKR1B1P15121 316 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 CREB1P16220 341 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 MARCKSL1P49006 195 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 FMO5P49326 533 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 CDR2Q01850 454 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 FAM228AQ86W67 206 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 GRK7Q8WTQ7 553 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 DNAJC9Q8WXX5 260 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 VTI1AQ96AJ9 217 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 DYDC2Q96IM9 177 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 STK33Q9BYT3 514 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 GANQ9H2C0 597 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 TDRD3Q9H7E2 651 aaKnown RBP13.39□□□□□ -0.27
BDNF-202ENST00000356660 TAS2R14Q9NYV8 317 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 ARHGAP42A6NI28 874 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 GH2P01242 217 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 ARHGAP4P98171 946 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 CNGA2Q16280 664 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 PDCD2Q16342 344 aaPredicted RBP13.39□□□□□ -0.27
BDNF-202ENST00000356660 LACTB2Q53H82 288 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms