RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 AGMOQ6ZNB7 445 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 CABP7Q86V35 215 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 ZNF280BQ86YH2 543 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
CAPN3-204ENST00000356316 AUTS2Q8WXX7 1259 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 TNFRSF25Q93038 417 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 CCDC51Q96ER9 411 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 MRPL17Q9NRX2 175 aaKnown RBP11.85□□□□□ -0.51
CAPN3-204ENST00000356316 DBR1Q9UK59 544 aaKnown RBP11.85□□□□□ -0.51
CAPN3-204ENST00000356316 ARID2Q68CP9 1835 aa11.85□□□□□ -0.51
CAPN3-204ENST00000356316 NRP1O14786 923 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 DDHD2O94830 711 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 LYPLA2O95372 231 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 LARGE1O95461 756 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 SSBP05455 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAPN3-204ENST00000356316 MCM7P33993 719 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 SIGLEC14Q08ET2 396 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
CAPN3-204ENST00000356316 PTPN21Q16825 1174 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 UBXN11Q5T124 520 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 TMEM173Q86WV6 379 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-204ENST00000356316 ERMNQ8TAM6 284 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 PIGOQ8TEQ8 1089 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 FBXL18Q96ME1 805 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 PRRX2Q99811 253 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 CSRNP2Q9H175 543 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 LIMCH1Q9UPQ0 1083 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 IPPQ9Y573 584 aa11.84□□□□□ -0.51
CAPN3-204ENST00000356316 ARL5CA6NH57 179 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 TSPAN1O60635 241 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 JAK2O60674 1132 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 EPCAMP16422 314 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 ARL2P36404 184 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 OR1G1P47890 313 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 GUCY1B3Q02153 619 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 KIAA1841Q6NSI8 718 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 MAEAQ7L5Y9 396 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 FBXL6Q8N531 539 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 C12orf76Q8N812 135 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-204ENST00000356316 SLC22A17Q8WUG5 538 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 CPB2Q96IY4 423 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 MTMR9Q96QG7 549 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 NACC1Q96RE7 527 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 GAD1Q99259 594 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 COLEC11Q9BWP8 271 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 APOL6Q9BWW8 343 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 POMKQ9H5K3 350 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 DPP7Q9UHL4 492 aa11.83□□□□□ -0.52
CAPN3-204ENST00000356316 A0A087WWV3 80 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 LRRIQ4A6NIV6 560 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 C2CD2LO14523 706 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 URODP06132 367 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 WEE2P0C1S8 567 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 RARRES1P49788 294 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 AFF1P51825 1210 aaKnown RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 MBTD1Q05BQ5 628 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 MTMR3Q13615 1198 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 CAPSQ13938 189 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 PTPN14Q15678 1187 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 TMC5Q6UXY8 1006 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 ALYREFQ86V81 257 aaKnown RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 ZBTB8OSQ8IWT0 167 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 UBALD2Q8IYN6 164 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 TDRD5Q8NAT2 981 aaKnown RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 FAM184AQ8NB25 1140 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 KREMEN2Q8NCW0 462 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 SMG8Q8ND04 991 aaKnown RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 MCPH1Q8NEM0 835 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 BCL7CQ8WUZ0 217 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 C8orf76Q96K31 380 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 KLHL5Q96PQ7 755 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 LLPHQ9BRT6 129 aaKnown RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 EIF2AQ9BY44 585 aaKnown RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 NFKBIZQ9BYH8 718 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 SFXN1Q9H9B4 322 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 XPNPEP1Q9NQW7 623 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 SORCS3Q9UPU3 1222 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 GIT1Q9Y2X7 761 aa11.82□□□□□ -0.52
CAPN3-204ENST00000356316 PRG3Q9Y2Y8 225 aaPredicted RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 TDRD15B5MCY1 1934 aaKnown RBP11.82□□□□□ -0.52
CAPN3-204ENST00000356316 POTEMA6NI47 508 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 USO1O60763 962 aaKnown RBP11.81□□□□□ -0.52
CAPN3-204ENST00000356316 SOD2P04179 222 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 ADH1AP07327 375 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 CNPP09543 421 aaKnown RBP11.81□□□□□ -0.52
CAPN3-204ENST00000356316 ARF4P18085 180 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-204ENST00000356316 GLRA2P23416 452 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 MLH1P40692 756 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 RBM25P49756 843 aaKnown RBP11.81□□□□□ -0.52
CAPN3-204ENST00000356316 NHLH1Q02575 133 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 SLC27A1Q6PCB7 646 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 CATSPER3Q86XQ3 398 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 COLGALT2Q8IYK4 626 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 ASAP3Q8TDY4 903 aa11.81□□□□□ -0.52
CAPN3-204ENST00000356316 ZSCAN31Q96LW9 406 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms