RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 FAM20AQ96MK3 541 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 NUP85Q9BW27 656 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 HEMGNQ9BXL5 484 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 C2orf40Q9H1Z8 148 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 KBTBD4Q9NVX7 518 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 WDR91A4D1P6 747 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 PHF20L1A8MW92 1017 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 TXNDC9O14530 226 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 BAG2O95816 211 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 NMT1P30419 496 aaKnown RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 CHRNA3P32297 505 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 YWHAGP61981 247 aaKnown RBP eCLIP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 TAF11Q15544 211 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 CCDC137Q6PK04 289 aaKnown RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 SLC35G2Q8TBE7 412 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 EIF2AK1Q9BQI3 630 aaKnown RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 CNOT8Q9UFF9 292 aaKnown RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 DYNC1LI2O43237 492 aaPredicted RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 MYBP10242 640 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 PLS3P13797 630 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 GALCP54803 685 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 PEX3P56589 373 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 KRT81Q14533 505 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 ZNF564Q8TBZ8 553 aaPredicted RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 DMGDHQ9UI17 866 aaKnown RBP13.16□□□□□ -0.3
COLCA1-201ENST00000355430 POLIQ9UNA4 740 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 SLC37A4O43826 429 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 PTGISQ16647 500 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 SCYL2Q6P3W7 929 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 MTMR4Q9NYA4 1195 aa13.16□□□□□ -0.3
COLCA1-201ENST00000355430 PDXKO00764 312 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 DPYSL4O14531 572 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 MAPK6Q16659 721 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 C1orf228Q6PIY5 440 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 TRIM50Q86XT4 487 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.3
COLCA1-201ENST00000355430 SPDYE2BA6NHP3 402 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 ARHGAP42A6NI28 874 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 MAP2K7O14733 419 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 SPDYE6P0CI01 402 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
COLCA1-201ENST00000355430 USP11P51784 963 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 BSPRYQ5W0U4 402 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 RFX6Q8HWS3 928 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 PRMT1Q99873 361 aaKnown RBP13.15□□□□□ -0.3
COLCA1-201ENST00000355430 LDHAP00338 332 aaKnown RBP13.15□□□□□ -0.3
COLCA1-201ENST00000355430 ARRDC4Q8NCT1 418 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 HAUS1Q96CS2 278 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 PITPNM3Q9BZ71 974 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 ISCUQ9H1K1 167 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 ARHGAP20Q9P2F6 1191 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 C16orf86Q6ZW13 317 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 PLEKHH3Q7Z736 793 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 SRRM1Q8IYB3 904 aaKnown RBP13.15□□□□□ -0.3
COLCA1-201ENST00000355430 CYFIP2Q96F07 1278 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 GBP5Q96PP8 586 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 RGL1Q9NZL6 768 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 SLC8A2Q9UPR5 921 aa13.15□□□□□ -0.3
COLCA1-201ENST00000355430 GPR75-ASB3A0A0A6YYF3 556 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 CHN1P15882 459 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 DPF3Q92784 378 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 ECT2Q9H8V3 914 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 SAYSD1Q9NPB0 183 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 LCMT1Q9UIC8 334 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 GGT7Q9UJ14 662 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 PDHBP11177 359 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 CPT1AP50416 773 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 VAMP7P51809 220 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 DHX34Q14147 1143 aaKnown RBP13.14□□□□□ -0.31
COLCA1-201ENST00000355430 PADI6Q6TGC4 694 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 SH3RF1Q7Z6J0 888 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 CFAP61Q8NHU2 1237 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.14□□□□□ -0.31
COLCA1-201ENST00000355430 MTRQ99707 1265 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 NOP53Q9NZM5 478 aaKnown RBP13.14□□□□□ -0.31
COLCA1-201ENST00000355430 XPAP23025 273 aaPredicted RBP13.14□□□□□ -0.31
COLCA1-201ENST00000355430 ZNF543Q08ER8 600 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 SDCCAG8Q86SQ7 713 aaPredicted RBP13.14□□□□□ -0.31
COLCA1-201ENST00000355430 ANKS1AQ92625 1134 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 SEC16BQ96JE7 1060 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 MRPL47Q9HD33 250 aaKnown RBP13.14□□□□□ -0.31
COLCA1-201ENST00000355430 FAM208AQ9UK61 1670 aaKnown RBP13.14□□□□□ -0.31
COLCA1-201ENST00000355430 GOLGA8SH3BPF8 625 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 CA4P22748 312 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 HSD17B3P37058 310 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 CDK17Q00537 523 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 PPP2R5DQ14738 602 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 KDM7AQ6ZMT4 941 aa13.14□□□□□ -0.31
COLCA1-201ENST00000355430 C1orf54Q8WWF1 131 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms