RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ZNF112Q9UJU3 913 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 COQ4Q9Y3A0 265 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 FGGP02679 453 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 GTF2H1P32780 548 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 ABCD1P33897 745 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 TRADDQ15628 312 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 RPUSD2Q8IZ73 545 aaKnown RBP24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 MORC4Q8TE76 937 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 NSUN6Q8TEA1 469 aaKnown RBP24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 SLC20A1Q8WUM9 679 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 CDHR1Q96JP9 859 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 CAPS2Q9BXY5 557 aa24.03■■□□□ 1.44
NKX2-1-201ENST00000354822 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 PPFIA4O75335 1185 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 ADSSP30520 456 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 SKOR1P84550 965 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 TTMPQ5BVD1 217 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 LRIG3Q6UXM1 1119 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 PALB2Q86YC2 1186 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 PARD3BQ8TEW8 1205 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 PIK3R5Q8WYR1 880 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 SEC14L1Q92503 715 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 ARL8AQ96BM9 186 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 TMEM8AQ9HCN3 771 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 KCNG1Q9UIX4 513 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 UTP11Q9Y3A2 253 aaKnown RBP24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 GOLGA6L10A0A0M3HER8 536 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 DENND3A2RUS2 1198 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 ADRB2P07550 413 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 CEP170P1Q96L14 293 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 FBXL18Q96ME1 805 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 PICK1Q9NRD5 415 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 FAM114A2Q9NRY5 505 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 CTTNBP2NLQ9P2B4 639 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 AMACRQ9UHK6 382 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 RIPK3Q9Y572 518 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 ALG6Q9Y672 507 aa24.02■■□□□ 1.44
NKX2-1-201ENST00000354822 ZNF233A6NK53 670 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 ANKRD63C9JTQ0 380 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 STAM2O75886 525 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 PSAPP07602 524 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 ITGA4P13612 1032 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 ECHS1P30084 290 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 GPC3P51654 580 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 RTP1P59025 263 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 CBWD2Q8IUF1 395 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 UBL4BQ8N7F7 174 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 ZSWIM2Q8NEG5 633 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 MCPH1Q8NEM0 835 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 C12orf42Q96LP6 360 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 RNPC3Q96LT9 517 aaKnown RBP24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 MFSD14AQ96MC6 490 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 RPS6KC1Q96S38 1066 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 ADAMTS5Q9UNA0 930 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 COG5Q9UP83 839 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 ZNF541Q9H0D2 1346 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 GOLGA8IPA6NC78 632 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 GOLGA8JA6NMD2 632 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 C19orf81C9J6K1 198 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 USP8P40818 1118 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 IRAK1P51617 712 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 TRMT1LQ7Z2T5 733 aaKnown RBP24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 REPS2Q8NFH8 660 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 SHC3Q92529 594 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 GABBR1Q9UBS5 961 aa24.01■■□□□ 1.43
NKX2-1-201ENST00000354822 NFASCO94856 1347 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 DGAT1O75907 488 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 MTA2O94776 668 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 KRT14P02533 472 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 HSPA6P17066 643 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 DSG3P32926 999 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 PTENP60484 403 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 MAP2K1Q02750 393 aaPredicted RBP24■■□□□ 1.43
NKX2-1-201ENST00000354822 EMC10Q5UCC4 262 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 SNRNP48Q6IEG0 339 aaKnown RBP24■■□□□ 1.43
NKX2-1-201ENST00000354822 APOBEC3FQ8IUX4 373 aaKnown RBP24■■□□□ 1.43
NKX2-1-201ENST00000354822 PPM1KQ8N3J5 372 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 EPS8L1Q8TE68 723 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 RAB17Q9H0T7 212 aa24■■□□□ 1.43
NKX2-1-201ENST00000354822 NOCTQ9UK39 431 aaKnown RBP24■■□□□ 1.43
NKX2-1-201ENST00000354822 H0YCG3 227 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 POU5F1Q01860 360 aaKnown RBP23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 MTMR3Q13615 1198 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 SGPL1O95470 568 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 KCNA2P16389 499 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 PTPRAP18433 802 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 PRPF4BQ13523 1007 aaKnown RBP23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 BRDTQ58F21 947 aaPredicted RBP23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 DCAF12L1Q5VU92 463 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 FBXL13Q8NEE6 735 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 FAM81BQ96LP2 452 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 KREMEN1Q96MU8 473 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 NT5C1BQ96P26 610 aa23.99■■□□□ 1.43
NKX2-1-201ENST00000354822 SYNGAP1Q96PV0 1343 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 ATP2A1O14983 1001 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 GARTP22102 1010 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 CCDC127Q96BQ5 260 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 WNK4Q96J92 1243 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 GOLGA6L10A6NI86 522 aa23.98■■□□□ 1.43
NKX2-1-201ENST00000354822 HMGB1P1B2RPK0 211 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms