RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SLC9A9Q8IVB4 645 aa21.08■□□□□ 0.97
COL13A1-201ENST00000354547 EIF1ADQ8N9N8 165 aaKnown RBP21.08■□□□□ 0.97
COL13A1-201ENST00000354547 FLAD1Q8NFF5 587 aa21.08■□□□□ 0.97
COL13A1-201ENST00000354547 NAP1L3Q99457 506 aaPredicted RBP21.08■□□□□ 0.97
COL13A1-201ENST00000354547 BRWD3Q6RI45 1802 aa21.08■□□□□ 0.97
COL13A1-201ENST00000354547 TESPA1A2RU30 521 aaPredicted RBP21.08■□□□□ 0.96
COL13A1-201ENST00000354547 ANKRD63C9JTQ0 380 aa21.08■□□□□ 0.96
COL13A1-201ENST00000354547 SPOPO43791 374 aa21.08■□□□□ 0.96
COL13A1-201ENST00000354547 CAND2O75155 1236 aa21.08■□□□□ 0.96
COL13A1-201ENST00000354547 EPC2Q52LR7 807 aa21.08■□□□□ 0.96
COL13A1-201ENST00000354547 RHOT2Q8IXI1 618 aa21.08■□□□□ 0.96
COL13A1-201ENST00000354547 UBL4BQ8N7F7 174 aa21.08■□□□□ 0.96
COL13A1-201ENST00000354547 SEMA4DQ92854 862 aa21.08■□□□□ 0.96
COL13A1-201ENST00000354547 ZNF536O15090 1300 aa21.08■□□□□ 0.96
COL13A1-201ENST00000354547 PPP2R2AP63151 447 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 ZDHHC14Q8IZN3 488 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 DHX38Q92620 1227 aaKnown RBP21.07■□□□□ 0.96
COL13A1-201ENST00000354547 NBPF9Q3BBW0 867 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 DUPD1Q68J44 220 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 CCDC25Q86WR0 208 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 KREMEN1Q96MU8 473 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 AGO4Q9HCK5 861 aaKnown RBP21.07■□□□□ 0.96
COL13A1-201ENST00000354547 PNMA2Q9UL42 364 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 BHMG1C9JSJ3 638 aaPredicted RBP21.07■□□□□ 0.96
COL13A1-201ENST00000354547 MEFVO15553 781 aaPredicted RBP21.07■□□□□ 0.96
COL13A1-201ENST00000354547 ATP2C2O75185 946 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 ICAM1P05362 532 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 DLATP10515 647 aaKnown RBP21.07■□□□□ 0.96
COL13A1-201ENST00000354547 PYGMP11217 842 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 SLCO1A2P46721 670 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 PDE4CQ08493 712 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 QPCTQ16769 361 aa21.07■□□□□ 0.96
COL13A1-201ENST00000354547 TTC7AQ9ULT0 858 aaPredicted RBP21.07■□□□□ 0.96
COL13A1-201ENST00000354547 CHRNB2P17787 502 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 BIRC3Q13489 604 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 TTC27Q6P3X3 843 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 PRELID2Q8N945 189 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 EPS8L1Q8TE68 723 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 NUP85Q9BW27 656 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 SLC12A6Q9UHW9 1150 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 CLSTN1O94985 981 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 FAM107AO95990 144 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 MUTP22033 750 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 CCDC105Q8IYK2 499 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 ZNF653Q96CK0 615 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 CYFIP2Q96F07 1278 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 ZSWIM1Q9BR11 485 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 PI4K2AQ9BTU6 479 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 USP20Q9Y2K6 914 aa21.06■□□□□ 0.96
COL13A1-201ENST00000354547 GMNCA6NCL1 334 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 PHF20L1A8MW92 1017 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 HSD17B4P51659 736 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 PMS2P54278 862 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 SNRNP35Q16560 246 aaKnown RBP21.05■□□□□ 0.96
COL13A1-201ENST00000354547 SPDYE2Q495Y8 402 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 C2CD6Q53TS8 623 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 CCDC137Q6PK04 289 aaKnown RBP21.05■□□□□ 0.96
COL13A1-201ENST00000354547 CLEC4DQ8WXI8 215 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 SEC14L1Q92503 715 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 SELENOSQ9BQE4 189 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 TRPC6Q9Y210 931 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 PLSCR1O15162 318 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 RTN2O75298 545 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 FGFR4P22455 802 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 RPL21P46778 160 aaKnown RBP21.05■□□□□ 0.96
COL13A1-201ENST00000354547 RPS6P62753 249 aaKnown RBP21.05■□□□□ 0.96
COL13A1-201ENST00000354547 RASA3Q14644 834 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 SEL1L2Q5TEA6 688 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 RAPGEF5Q92565 580 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 ZDHHC18Q9NUE0 388 aa21.05■□□□□ 0.96
COL13A1-201ENST00000354547 KIAA0391O15091 583 aaKnown RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 KRT5P13647 590 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 SLC29A2Q14542 456 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 PSMD1Q99460 953 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 SEMA4AQ9H3S1 761 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 SYNPO2Q9UMS6 1093 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 DIS3Q9Y2L1 958 aaKnown RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 CTDP1Q9Y5B0 961 aaPredicted RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 ATP8B3O60423 1300 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 ASTN2O75129 1339 aaPredicted RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 ADSSP30520 456 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 PTGER2P43116 358 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 SNX1Q13596 522 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 EMC10Q5UCC4 262 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 FMNL3Q8IVF7 1028 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 PRPF38AQ8NAV1 312 aaKnown RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 SUPT20HQ8NEM7 779 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 ZNF564Q8TBZ8 553 aaPredicted RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 SYTL5Q8TDW5 730 aaPredicted RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 CCDC113Q9H0I3 377 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 RASAL2Q9UJF2 1139 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 PPFIA2O75334 1257 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 SF3B2Q13435 895 aaKnown RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 DENND2CQ68D51 928 aa21.04■□□□□ 0.96
COL13A1-201ENST00000354547 LMBRD2Q68DH5 695 aaPredicted RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 C1orf131Q8NDD1 294 aaKnown RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 RNF25Q96BH1 459 aaPredicted RBP21.04■□□□□ 0.96
COL13A1-201ENST00000354547 SYNGAP1Q96PV0 1343 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 PHF2O75151 1096 aa21.03■□□□□ 0.96
COL13A1-201ENST00000354547 ASNSP08243 561 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms