RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 STAT5AP42229 794 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 BCAR1P56945 870 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 FMO1Q01740 532 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 IFIT5Q13325 482 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 SLC35G1Q2M3R5 365 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 CCDC93Q567U6 631 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 XP32Q5T750 250 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 ARMC3Q5W041 872 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 STK32CQ86UX6 486 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 KRT78Q8N1N4 520 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 FAM26EQ8N5C1 309 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 LZTR1Q8N653 840 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 PIWIL2Q8TC59 973 aaKnown RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 STON2Q8WXE9 905 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 SOX7Q9BT81 388 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 MAGEH1Q9H213 219 aa1.98□□□□□ -2.09
BRCA1-202ENST00000354071 MAGED2Q9UNF1 606 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 KMT2BQ9UMN6 2715 aaPredicted RBP1.98□□□□□ -2.09
BRCA1-202ENST00000354071 TCRBV5S2A0A599 114 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 GOLGA6L22H0YM25 854 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 H3BUI4 141 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ACKR2O00590 384 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ARHGAP6O43182 974 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PSPNO60542 156 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 TMEM127O75204 238 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 GYS1P13807 737 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 HSPA7P48741 367 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 RTP1P59025 263 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 MRPS9P82933 396 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 TNFAIP2Q03169 654 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 BNIP3Q12983 259 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ACAP1Q15027 740 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 MPEG1Q2M385 716 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PAN2Q504Q3 1202 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SLFN12LQ6IEE8 588 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 TLDC1Q6P9B6 456 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ABHD15Q6UXT9 468 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 FAM129CQ86XR2 697 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ACRBPQ8NEB7 543 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 REPS2Q8NFH8 660 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 NLGN2Q8NFZ4 835 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 IPO4Q8TEX9 1081 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 GAB3Q8WWW8 586 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 RGMAQ96B86 450 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 MAP6Q96JE9 813 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 FCRL2Q96LA5 508 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 UBXN10Q96LJ8 280 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 C1orf43Q9BWL3 253 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CEP41Q9BYV8 373 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 OSBPL5Q9H0X9 879 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SEMA6BQ9H3T3 888 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ARFGAP3Q9NP61 516 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 OBP2BQ9NPH6 170 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 DCP1AQ9NPI6 582 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 LRFN1Q9P244 771 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SWAP70Q9UH65 585 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 TPCN1Q9ULQ1 816 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CRYL1Q9Y2S2 319 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CDY2AQ9Y6F7 541 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SPHKAPQ2M3C7 1700 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PTPRMP28827 1452 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CUX1P39880 1505 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 NCAM2O15394 837 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 MBD4O95243 580 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 BRAFP15056 766 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PRKCAP17252 672 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 RGS19P49795 217 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 NOGQ13253 232 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 RTP5Q14D33 572 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 EPHA7Q15375 998 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 IZUMO3Q5VZ72 239 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PAOXQ6QHF9 649 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF574Q6ZN55 896 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 C1orf122Q6ZSJ8 110 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ESPNLQ6ZVH7 1005 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PHYKPLQ8IUZ5 450 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SP8Q8IXZ3 490 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CCHCR1Q8TD31 782 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PDCD2LQ9BRP1 358 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ALG13Q9NP73 1137 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ASH2LQ9UBL3 628 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 LRCH1Q9Y2L9 728 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 COA3Q9Y2R0 106 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 CCER2I3L3R5 266 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SBK3P0C264 359 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 HDCP19113 662 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SMARCA1P28370 1054 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 MCAMP43121 646 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 GRK6P43250 576 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SUMO3P55854 103 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 RPS16P62249 146 aaKnown RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 HTRA4P83105 476 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ADCY2Q08462 1091 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 SNX17Q15036 470 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PFKFB4Q16877 469 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PRSS36Q5K4E3 855 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 PDZD4Q76G19 769 aaPredicted RBP1.97□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF527Q8NB42 609 aa1.97□□□□□ -2.09
BRCA1-202ENST00000354071 C1orf131Q8NDD1 294 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms