RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PHLDB3Q6NSJ2 640 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 TMTC3Q6ZXV5 915 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 SLC15A3Q8IY34 581 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 GUF1Q8N442 669 aaKnown RBP14.16□□□□□ -0.14
IFT88-202ENST00000351808 C10orf82Q8WW14 230 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 TSPAN18Q96SJ8 248 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 ECSITQ9BQ95 431 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 TCP11L1Q9NUJ3 509 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 PARP2Q9UGN5 583 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 PTPN22Q9Y2R2 807 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 GYG2O15488 501 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 PYGMP11217 842 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 HARSP12081 509 aaKnown RBP14.16□□□□□ -0.14
IFT88-202ENST00000351808 INF2Q27J81 1249 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 TMEM259Q4ZIN3 620 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 SH3D19Q5HYK7 790 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 TTC27Q6P3X3 843 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 BLIDQ8IZY5 108 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 VPS52Q8N1B4 723 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 MCUR1Q96AQ8 359 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 BTBD10Q9BSF8 475 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 GANQ9H2C0 597 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 TMOD4Q9NZQ9 345 aa14.16□□□□□ -0.14
IFT88-202ENST00000351808 SPDYE16A6NNV3 312 aaPredicted RBP14.15□□□□□ -0.14
IFT88-202ENST00000351808 CCDC22O60826 627 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 SNRPA1P09661 255 aaKnown RBP14.15□□□□□ -0.14
IFT88-202ENST00000351808 ZFXP17010 805 aaPredicted RBP14.15□□□□□ -0.14
IFT88-202ENST00000351808 AMPD1P23109 780 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 TROAPQ12815 778 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 METTL24Q5JXM2 366 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 SYDE2Q5VT97 1194 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 PPP1R21Q6ZMI0 780 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 NLRP9Q7RTR0 991 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 PPP1R14BQ96C90 147 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 MAGEF1Q9HAY2 307 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 UBN1Q9NPG3 1134 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 ZNF180Q9UJW8 692 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 PCDHA3Q9Y5H8 950 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 C5P01031 1676 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 MYMKA6NI61 221 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 ATP9BO43861 1147 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 SPAG7O75391 227 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 CETPP11597 493 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 TMEM266Q2M3C6 531 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 CTC1Q2NKJ3 1217 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 OLFML1Q6UWY5 402 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 CLNKQ7Z7G1 428 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 LCORLQ8N3X6 602 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 U2AF1L4Q8WU68 220 aaKnown RBP14.15□□□□□ -0.14
IFT88-202ENST00000351808 TSG101Q99816 390 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 NACAP1Q9BZK3 213 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 EBF3Q9H4W6 596 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 PFDN4Q9NQP4 134 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 ARL8BQ9NVJ2 186 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 TMEM98Q9Y2Y6 226 aa14.15□□□□□ -0.14
IFT88-202ENST00000351808 AKAP11Q9UKA4 1901 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 CFAP69A5D8W1 941 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 CDK4P11802 303 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 HOXD12P35452 270 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 TXKP42681 527 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 PHKA1P46020 1223 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 CCDC80Q76M96 950 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 TRMT10CQ7L0Y3 403 aaKnown RBP14.14□□□□□ -0.15
IFT88-202ENST00000351808 EPM2AIP1Q7L775 607 aaPredicted RBP14.14□□□□□ -0.15
IFT88-202ENST00000351808 PRELID2Q8N945 189 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 ALG3Q92685 438 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 GPKOWQ92917 476 aaPredicted RBP eCLIP14.14□□□□□ -0.15
IFT88-202ENST00000351808 SMC6Q96SB8 1091 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 ZSCAN10Q96SZ4 725 aaPredicted RBP14.14□□□□□ -0.15
IFT88-202ENST00000351808 RNF41Q9H4P4 317 aaPredicted RBP14.14□□□□□ -0.15
IFT88-202ENST00000351808 CCDC194A0A1B0GVG4 234 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 PODXLO00592 558 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 PHF2O75151 1096 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 POLD1P28340 1107 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 CD97P48960 835 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 VPS41P49754 854 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 GALCP54803 685 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 KYNUQ16719 465 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 RBM26Q5T8P6 1007 aaKnown RBP14.14□□□□□ -0.15
IFT88-202ENST00000351808 CCDC137Q6PK04 289 aaKnown RBP14.14□□□□□ -0.15
IFT88-202ENST00000351808 TSHZ1Q6ZSZ6 1077 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 ART4Q93070 314 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 NAALADL1Q9UQQ1 740 aa14.14□□□□□ -0.15
IFT88-202ENST00000351808 RGPD2P0DJD1 1756 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 EMP3P54852 163 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 GPSM2P81274 684 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 CYLC2Q14093 348 aaPredicted RBP14.13□□□□□ -0.15
IFT88-202ENST00000351808 CCDC174Q6PII3 467 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 TRIM67Q6ZTA4 783 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 ZDHHC14Q8IZN3 488 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 CEP70Q8NHQ1 597 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 SLC35G2Q8TBE7 412 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 CTNNBL1Q8WYA6 563 aaPredicted RBP14.13□□□□□ -0.15
IFT88-202ENST00000351808 KCNN1Q92952 543 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 PPP2R3CQ969Q6 453 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 CYTH2Q99418 400 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 SAR1AQ9NR31 198 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 AAASQ9NRG9 546 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 PTTG2Q9NZH5 202 aa14.13□□□□□ -0.15
IFT88-202ENST00000351808 BTBD7Q9P203 1132 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms