RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
SAMM50-201ENST00000350028 AGTPBP1Q9UPW5 1226 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 NCANO14594 1321 aa18.07■□□□□ 0.48
SAMM50-201ENST00000350028 ADGRA3Q8IWK6 1321 aa18.07■□□□□ 0.48
SAMM50-201ENST00000350028 KIAA0391O15091 583 aaKnown RBP18.07■□□□□ 0.48
SAMM50-201ENST00000350028 KIF4AO95239 1232 aa18.07■□□□□ 0.48
SAMM50-201ENST00000350028 CYP24A1Q07973 514 aa18.07■□□□□ 0.48
SAMM50-201ENST00000350028 PPIL2Q13356 520 aa18.07■□□□□ 0.48
SAMM50-201ENST00000350028 GLE1Q53GS7 698 aaKnown RBP18.07■□□□□ 0.48
SAMM50-201ENST00000350028 SLFN11Q7Z7L1 901 aa18.07■□□□□ 0.48
SAMM50-201ENST00000350028 ZC3H15Q8WU90 426 aaKnown RBP18.07■□□□□ 0.48
SAMM50-201ENST00000350028 NRBP2Q9NSY0 501 aa18.07■□□□□ 0.48
SAMM50-201ENST00000350028 GSTTP1A0A1W2PQM5 241 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 LRRIQ3A6PVS8 624 aaPredicted RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 PEX10O60683 326 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 CNMDO75829 334 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 UBA1P22314 1058 aaKnown RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 RFC5P40937 340 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 GPC3P51654 580 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 MFAP3P55082 362 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 GPS2Q13227 327 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 SMC1AQ14683 1233 aaKnown RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 FAM160B1Q5W0V3 765 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 DPY19L2Q6NUT2 758 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 CCNI2Q6ZMN8 369 aaPredicted RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 CTNNBL1Q8WYA6 563 aaPredicted RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 BICD1Q96G01 975 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 PAGR1Q9BTK6 254 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 PORCNQ9H237 461 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 HNRNPDLO14979 420 aaKnown RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 LRRN2O75325 713 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 FARP2O94887 1054 aaPredicted RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 NAMPTP43490 491 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 MAP2K1Q02750 393 aaPredicted RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 STRN3Q13033 797 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 TAS1R3Q7RTX0 852 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 RFFLQ8WZ73 363 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 CCDC127Q96BQ5 260 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 CLMNQ96JQ2 1002 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 CALR3Q96L12 384 aaKnown RBP18.06■□□□□ 0.48
SAMM50-201ENST00000350028 SELENOOQ9BVL4 669 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 PPME1Q9Y570 386 aa18.06■□□□□ 0.48
SAMM50-201ENST00000350028 ANKRD62A6NC57 917 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 ZNF233A6NK53 670 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 OSBPP22059 807 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 ARL2P36404 184 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 LIG4P49917 911 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 FAM193AP78312 1265 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 TTLL12Q14166 644 aaPredicted RBP18.05■□□□□ 0.48
SAMM50-201ENST00000350028 CASP8Q14790 479 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 KCNV1Q6PIU1 500 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 FASTKD5Q7L8L6 764 aaKnown RBP18.05■□□□□ 0.48
SAMM50-201ENST00000350028 DNAAF5Q86Y56 855 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 FAM71AQ8IYT1 594 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 FBXL13Q8NEE6 735 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 AFAP1L1Q8TED9 768 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 ZNF526Q8TF50 670 aaPredicted RBP18.05■□□□□ 0.48
SAMM50-201ENST00000350028 SLC7A3Q8WY07 619 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 SEPT1Q8WYJ6 367 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 MS4A14Q96JA4 679 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 LRRC1Q9BTT6 524 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 ACBD3Q9H3P7 528 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 EHD2Q9NZN4 543 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 SUCLA2Q9P2R7 463 aaPredicted RBP18.05■□□□□ 0.48
SAMM50-201ENST00000350028 STXBP5LQ9Y2K9 1186 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 STYXL1Q9Y6J8 313 aa18.05■□□□□ 0.48
SAMM50-201ENST00000350028 EXTL3O43909 919 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 PIGRP01833 764 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 MATR3P43243 847 aaKnown RBP eCLIP18.04■□□□□ 0.48
SAMM50-201ENST00000350028 STAT5BP51692 787 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 PEX26Q7Z412 305 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 DEPTORQ8TB45 409 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 SEMA4DQ92854 862 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 NT5C1BQ96P26 610 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 CEP89Q96ST8 783 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 PCYT2Q99447 389 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 VIPAS39Q9H9C1 493 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 SMARCAL1Q9NZC9 954 aa18.04■□□□□ 0.48
SAMM50-201ENST00000350028 PACSIN2Q9UNF0 486 aaPredicted RBP18.04■□□□□ 0.48
SAMM50-201ENST00000350028 GLRA2P23416 452 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 TARBP2Q15633 366 aaKnown RBP18.03■□□□□ 0.48
SAMM50-201ENST00000350028 SLFN12LQ6IEE8 588 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 METTL7BQ6UX53 244 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 ASAP3Q8TDY4 903 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 SHC3Q92529 594 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 TMEM143Q96AN5 459 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 FAM81BQ96LP2 452 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 RBM12Q9NTZ6 932 aaKnown RBP18.03■□□□□ 0.48
SAMM50-201ENST00000350028 SEPT11Q9NVA2 429 aaKnown RBP18.03■□□□□ 0.48
SAMM50-201ENST00000350028 RAB20Q9NX57 234 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 SCN4AP35499 1836 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 TMCO5BA8MYB1 307 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 KCNK3O14649 394 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 ZC3H11AO75152 810 aaKnown RBP eCLIP18.03■□□□□ 0.48
SAMM50-201ENST00000350028 GGPS1O95749 300 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 DNA2P51530 1060 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 TCEAL1Q15170 157 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 C8orf74Q6P047 294 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 SV2AQ7L0J3 742 aa18.03■□□□□ 0.48
SAMM50-201ENST00000350028 ARMC9Q7Z3E5 817 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms