RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CCDC137Q6PK04 289 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 CBWD2Q8IUF1 395 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 RHOT2Q8IXI1 618 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 EPS8L3Q8TE67 593 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 EPS8L1Q8TE68 723 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 SAAL1Q96ER3 474 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 MXRA8Q9BRK3 442 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 VCPKMTQ9H867 229 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 TRPC6Q9Y210 931 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 DIS3Q9Y2L1 958 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 PCDHA3Q9Y5H8 950 aa19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 ATXN2Q99700 1313 aaKnown RBP19.49■□□□□ 0.71
PTP4A3-202ENST00000349124 FOXO6A8MYZ6 492 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 NPM3O75607 178 aaKnown RBP19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 ADRB2P07550 413 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 NBPF9Q3BBW0 867 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 NEK9Q8TD19 979 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 TATDN2Q93075 761 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 XPO6Q96QU8 1125 aaKnown RBP19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 NAP1L3Q99457 506 aaPredicted RBP19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 CD248Q9HCU0 757 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 DBR1Q9UK59 544 aaKnown RBP19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 MRPL11Q9Y3B7 192 aaKnown RBP19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 GOLGA6L7A0A1B0GV03 622 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 FAM187AA6NFU0 413 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 PHF2O75151 1096 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 RARAP10276 462 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 DGKZQ13574 1117 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 DENND2CQ68D51 928 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 CCDC25Q86WR0 208 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 DHX38Q92620 1227 aaKnown RBP19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 TOPORSQ9NS56 1045 aaPredicted RBP19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 ATRNL1Q5VV63 1379 aa19.48■□□□□ 0.71
PTP4A3-202ENST00000349124 NRXN2Q9P2S2 1712 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 DHX15O43143 795 aaKnown RBP19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 RARRES1P49788 294 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 PEX3P56589 373 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 UGCGQ16739 394 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 ERMARDQ5T6L9 678 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 INTS8Q75QN2 995 aaKnown RBP19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 HAUS6Q7Z4H7 955 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 HOMER2Q9NSB8 354 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 LARSQ9P2J5 1176 aaKnown RBP19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 NOCTQ9UK39 431 aaKnown RBP19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 CCDC105Q8IYK2 499 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 CPXCR1Q8N123 301 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 KCTD17Q8N5Z5 321 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 UBL4BQ8N7F7 174 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 CCDC114Q96M63 670 aa19.47■□□□□ 0.71
PTP4A3-202ENST00000349124 PAEPP09466 180 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 SOX10P56693 466 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 DHX34Q14147 1143 aaKnown RBP19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 CACNA2D3Q8IZS8 1091 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 XXYLT1Q8NBI6 393 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 CHURC1Q8WUH1 139 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 NUP85Q9BW27 656 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 TRIM7Q9C029 511 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 TMEM39BQ9GZU3 492 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 QTRT2Q9H974 415 aaKnown RBP19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 SLC40A1Q9NP59 571 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 ZBTB12Q9Y330 459 aaPredicted RBP19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 UBE4BO95155 1302 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 SRRM3A6NNA2 597 aaPredicted RBP19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 RTN2O75298 545 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 CTNNA2P26232 953 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 ADSSP30520 456 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 FMO1Q01740 532 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 SNX1Q13596 522 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 C2CD6Q53TS8 623 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 PLA2G4FQ68DD2 849 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 C1orf54Q8WWF1 131 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 JPH2Q9BR39 696 aaPredicted RBP19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 DNAJC17Q9NVM6 304 aaKnown RBP19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 KCND2Q9NZV8 630 aa19.46■□□□□ 0.71
PTP4A3-202ENST00000349124 C5orf60A6NFR6 353 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 SPOPO43791 374 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 RAD17O75943 681 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 NUDT17P0C025 328 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 IBSPP21815 317 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 IFNAR2P48551 515 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 MXI1P50539 228 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 EIF3BP55884 814 aaKnown RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 ACCSQ96QU6 501 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 CCDC113Q9H0I3 377 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 VEZTQ9HBM0 779 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 CHRNA3P32297 505 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 ANKRD20A8PQ5CZ79 823 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 DAB2IPQ5VWQ8 1189 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 C11orf63Q6NUN7 778 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 LLGL2Q6P1M3 1020 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 FAM71AQ8IYT1 594 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 CD101Q93033 1021 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 CHMP6Q96FZ7 201 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 HAUS2Q9NVX0 235 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 MYH11P35749 1972 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 RGS16O15492 202 aaPredicted RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 CLDN3O15551 220 aa19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 P4HBP07237 508 aaKnown RBP19.45■□□□□ 0.7
PTP4A3-202ENST00000349124 PLS3P13797 630 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms