RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 FBXO33Q7Z6M2 555 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 PALB2Q86YC2 1186 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 PPFIBP2Q8ND30 876 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 TXLNGQ9NUQ3 528 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 AFPP02771 609 aaKnown RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 RASSF2P50749 326 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 MCL1Q07820 350 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 PHF12Q96QT6 1004 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 DDX3XO00571 662 aaKnown RBP eCLIP16.24■□□□□ 0.195e-19■■■■□ 22.3
PTBP1-201ENST00000349038 KIAA0391O15091 583 aaKnown RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 CHKAP35790 457 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 KLRC3Q07444 240 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 MAPK7Q13164 816 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 KPNB1Q14974 876 aaKnown RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 GPBP1Q86WP2 473 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 MYLK4Q86YV6 388 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 PDCD7Q8N8D1 485 aaKnown RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 NAP1L3Q99457 506 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 STMN4Q9H169 189 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-201ENST00000349038 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
PTBP1-201ENST00000349038 PVALEFA0A1B0GWK0 134 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 ATP6V1G1O75348 118 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 XRCC5P13010 732 aaKnown RBP16.23■□□□□ 0.19
PTBP1-201ENST00000349038 NT5C2P49902 561 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 LRRC63Q05C16 580 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 ZDHHC24Q6UX98 284 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 MTDHQ86UE4 582 aaKnown RBP16.23■□□□□ 0.19
PTBP1-201ENST00000349038 LRRC57Q8N9N7 239 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 KLHL23Q8NBE8 558 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 SMC6Q96SB8 1091 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 ACP6Q9NPH0 428 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 BSDC1Q9NW68 430 aaPredicted RBP16.23■□□□□ 0.19
PTBP1-201ENST00000349038 SKIP12755 728 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 TNFAIP3P21580 790 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 GCLCP48506 637 aaPredicted RBP16.23■□□□□ 0.19
PTBP1-201ENST00000349038 ECM1Q16610 540 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.23■□□□□ 0.193e-6■■□□□ 12.2
PTBP1-201ENST00000349038 TEX9Q8N6V9 391 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 PGM2Q96G03 612 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 HEMGNQ9BXL5 484 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 EMILIN3Q9NT22 766 aa16.23■□□□□ 0.19
PTBP1-201ENST00000349038 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
PTBP1-201ENST00000349038 PALM3A6NDB9 673 aaPredicted RBP16.22■□□□□ 0.19
PTBP1-201ENST00000349038 FOXN2P32314 431 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 STAT1P42224 750 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 NEK3P51956 506 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 CYP4A11Q02928 519 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 SLC5A9Q2M3M2 681 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 FOXB2Q5VYV0 432 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 DUPD1Q68J44 220 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 TTC27Q6P3X3 843 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 SYN2Q92777 582 aaPredicted RBP16.22■□□□□ 0.19
PTBP1-201ENST00000349038 PIGSQ96S52 555 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 WASF2Q9Y6W5 498 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 STAT3P40763 770 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 CDR2Q01850 454 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 PABPC4Q13310 644 aaKnown RBP eCLIP16.22■□□□□ 0.198e-16■■□□□ 12.2
PTBP1-201ENST00000349038 FOXR2Q6PJQ5 311 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 SLC30A10Q6XR72 485 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 C3orf67Q6ZVT6 689 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 IRF2BP2Q7Z5L9 587 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 CENPTQ96BT3 561 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 ZDHHC18Q9NUE0 388 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 CHKBQ9Y259 395 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 ALADP13716 330 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 CASP5P51878 434 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 DBN1Q16643 649 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 VSTM1Q6UX27 236 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 EPM2AIP1Q7L775 607 aaPredicted RBP16.22■□□□□ 0.19
PTBP1-201ENST00000349038 SYCE1Q8N0S2 351 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 ZNF444Q8N0Y2 327 aaPredicted RBP16.22■□□□□ 0.19
PTBP1-201ENST00000349038 PNMA5Q96PV4 448 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 PHTF1Q9UMS5 762 aa16.22■□□□□ 0.19
PTBP1-201ENST00000349038 POTEB3A0JP26 581 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 POTECB2RU33 542 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 CA4P22748 312 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 ADCY8P40145 1251 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 KCNA1Q09470 495 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 C12orf60Q5U649 245 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 DAB2IPQ5VWQ8 1189 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 POTEBQ6S5H4 581 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 DDX18Q9NVP1 670 aaKnown RBP16.21■□□□□ 0.19
PTBP1-201ENST00000349038 STK17AQ9UEE5 414 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 ZFP69BQ9UJL9 534 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 TTC7AQ9ULT0 858 aaPredicted RBP16.21■□□□□ 0.19
PTBP1-201ENST00000349038 A6NJR5 290 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 KLRK1P26718 216 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 CRKLP46109 303 aaKnown RBP16.21■□□□□ 0.19
PTBP1-201ENST00000349038 PPP2R5CQ13362 524 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 THOC5Q13769 683 aaKnown RBP16.21■□□□□ 0.19
PTBP1-201ENST00000349038 P3H1Q32P28 736 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 C2CD6Q53TS8 623 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 ANKLE1Q8NAG6 615 aa16.21■□□□□ 0.19
PTBP1-201ENST00000349038 CFAP61Q8NHU2 1237 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 403.6 ms