RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 PRKCIP41743 596 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 NPEPPSP55786 919 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 DHX34Q14147 1143 aaKnown RBP20.03■□□□□ 0.8
SCARF1-202ENST00000348987 EXOC3L4Q17RC7 722 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 PRR16Q569H4 304 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 SLC27A3Q5K4L6 730 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 CROCCP2Q86T23 111 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 VPS36Q86VN1 386 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 CCDC25Q86WR0 208 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 CCDC65Q8IXS2 484 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 ANKRD27Q96NW4 1050 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 TMEM109Q9BVC6 243 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 COA1Q9GZY4 146 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 NT5C3AQ9H0P0 336 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 TMOD4Q9NZQ9 345 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 RASAL2Q9UJF2 1139 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 ADAMTSL1Q8N6G6 1762 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 MEIS2O14770 477 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 DRG2P55039 364 aaKnown RBP20.03■□□□□ 0.8
SCARF1-202ENST00000348987 PABPC4Q13310 644 aaKnown RBP eCLIP20.03■□□□□ 0.8
SCARF1-202ENST00000348987 CGB2Q6NT52 195 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 VSTM1Q6UX27 236 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 SLC30A10Q6XR72 485 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 CATSPER3Q86XQ3 398 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 LMNTD2Q8IXW0 634 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 PLCD4Q9BRC7 762 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 KLHL14Q9P2G3 628 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 MTRF1LQ9UGC7 380 aaKnown RBP20.03■□□□□ 0.8
SCARF1-202ENST00000348987 KRT18P05783 430 aaKnown RBP20.02■□□□□ 0.8
SCARF1-202ENST00000348987 NR2F2P24468 414 aa20.02■□□□□ 0.8
SCARF1-202ENST00000348987 SLC12A3P55017 1021 aa20.02■□□□□ 0.8
SCARF1-202ENST00000348987 SP8Q8IXZ3 490 aa20.02■□□□□ 0.8
SCARF1-202ENST00000348987 RAB3IPQ96QF0 476 aaPredicted RBP20.02■□□□□ 0.8
SCARF1-202ENST00000348987 C2CD2Q9Y426 696 aa20.02■□□□□ 0.8
SCARF1-202ENST00000348987 IGSF9BQ9UPX0 1349 aa20.02■□□□□ 0.8
SCARF1-202ENST00000348987 PEX11AO75192 247 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 GM2AP17900 193 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 HOXD13P35453 343 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 PTGIRP43119 386 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 MRPS35P82673 323 aaKnown RBP20.02■□□□□ 0.79
SCARF1-202ENST00000348987 SPIRE1Q08AE8 756 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 PPP2R5EQ16537 467 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 SLC5A9Q2M3M2 681 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 GRIPAP1Q4V328 841 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 KIAA0825Q8IV33 1275 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 ALG3Q92685 438 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 TMEM237Q96Q45 408 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 NAP1L3Q99457 506 aaPredicted RBP20.02■□□□□ 0.79
SCARF1-202ENST00000348987 CARD9Q9H257 536 aa20.02■□□□□ 0.79
SCARF1-202ENST00000348987 DDTLA6NHG4 134 aaPredicted RBP20.01■□□□□ 0.79
SCARF1-202ENST00000348987 CETN3O15182 167 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 MMP10P09238 476 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 TPBGLP0DKB5 382 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 ATP6V1C1P21283 382 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 PPP1R15BQ5SWA1 713 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 ECHDC2Q86YB7 292 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 SIAH1Q8IUQ4 282 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 CYP2W1Q8TAV3 490 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 PIGOQ8TEQ8 1089 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 RPS6KC1Q96S38 1066 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 ZCWPW1Q9H0M4 648 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 IKZF4Q9H2S9 585 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 DHX36Q9H2U1 1008 aaKnown RBP20.01■□□□□ 0.79
SCARF1-202ENST00000348987 KDM3AQ9Y4C1 1321 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 G3V3G9 751 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 H0Y3Z8 333 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 GFPT2O94808 682 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 MPP2Q14168 576 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 USH1GQ495M9 461 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 DCAF17Q5H9S7 520 aaPredicted RBP20.01■□□□□ 0.79
SCARF1-202ENST00000348987 DCAF8Q5TAQ9 597 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 MFSD5Q6N075 450 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 TMEM154Q6P9G4 183 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 GALNT15Q8N3T1 639 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 LNX1Q8TBB1 728 aaPredicted RBP20.01■□□□□ 0.79
SCARF1-202ENST00000348987 STK32AQ8WU08 396 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 CKAP2Q8WWK9 683 aa20.01■□□□□ 0.79
SCARF1-202ENST00000348987 TGS1Q96RS0 853 aaKnown RBP20.01■□□□□ 0.79
SCARF1-202ENST00000348987 FOCADQ5VW36 1801 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 BRWD3Q6RI45 1802 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 RSPH10B2B2RC85 870 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 FAM86B1E9PN63 330 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 AFPP02771 609 aaKnown RBP20■□□□□ 0.79
SCARF1-202ENST00000348987 FAM86B2P0C5J1 330 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 RSPH10BP0C881 870 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 CYP4A11Q02928 519 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 ARMC3Q5W041 872 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 GLYCTKQ8IVS8 523 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 DDX23Q9BUQ8 820 aaKnown RBP20■□□□□ 0.79
SCARF1-202ENST00000348987 CTNNAL1Q9UBT7 734 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 ARMCX3Q9UH62 379 aaPredicted RBP20■□□□□ 0.79
SCARF1-202ENST00000348987 PFASO15067 1338 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 NPTXRO95502 500 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 RARGP13631 454 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 POLD1P28340 1107 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 SKIV2L2P42285 1042 aaKnown RBP20■□□□□ 0.79
SCARF1-202ENST00000348987 ARHGAP4P98171 946 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 PPATQ06203 517 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 ADCY1Q08828 1119 aa20■□□□□ 0.79
SCARF1-202ENST00000348987 KCNA1Q09470 495 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms