RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 USP17L10C9JJH3 530 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 MYBL1P10243 752 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 ZWILCHQ9H900 591 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 TRPC7Q9HCX4 862 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 SYBUQ9NX95 663 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 STRIP2Q9ULQ0 834 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 ESYT2A0FGR8 921 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 BNIP3LO60238 219 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 THNSL1Q8IYQ7 743 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 HACD3Q9P035 362 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 PCDHGA3Q9Y5H0 932 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 PREX2Q70Z35 1606 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 PRLP01236 227 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 XPAP23025 273 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 SCTRP47872 440 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 CACNA2D1P54289 1103 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 CDO1Q16878 200 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 LENG1Q96BZ8 264 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 TMEM47Q9BQJ4 181 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 TRIM55Q9BYV6 548 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 ABCF3Q9NUQ8 709 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 TYW1Q9NV66 732 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 HDAC6Q9UBN7 1215 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 USP4Q13107 963 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 PTGISQ16647 500 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 DNAJC24Q6P3W2 148 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 KCTD6Q8NC69 237 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 CATSPER1Q8NEC5 780 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 GDAP1Q8TB36 358 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 HDAC11Q96DB2 347 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 CCDC28BQ9BUN5 200 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 RPF1Q9H9Y2 349 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 ANAPC5Q9UJX4 755 aa11.78□□□□□ -0.52
SMARCE1-202ENST00000348513 A0A1B0GW55 424 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 RSPH10B2B2RC85 870 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 RSPH10BP0C881 870 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 DUX4L2P0CJ85 424 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 DUX4L3P0CJ86 424 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 DUX4L4P0CJ87 422 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 DUX4L5P0CJ88 424 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 DUX4L6P0CJ89 424 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 DUX4L7P0CJ90 424 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 EIF4A3P38919 411 aaKnown RBP11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 MXI1P50539 228 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 ARHGEF6Q15052 776 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 ZNF394Q53GI3 561 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 DUX4Q9UBX2 424 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 RWDD2AQ9UIY3 292 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 CPDO75976 1380 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 ZNF521Q96K83 1311 aa11.77□□□□□ -0.52
SMARCE1-202ENST00000348513 TRIM43BA6NCK2 446 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 ASNSP08243 561 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 CYP19A1P11511 503 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 LRPAP1P30533 357 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 KRT20P35900 424 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 CARSP49589 748 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 SGO2Q562F6 1265 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 C1orf146Q5VVC0 180 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 FAM47EQ6ZV65 393 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 SYT2Q8N9I0 419 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 DDI1Q8WTU0 396 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 NMD3Q96D46 503 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 RUNDC3BQ96NL0 473 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 CACYBPQ9HB71 228 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 LRRC4Q9HBW1 653 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 ARPC4-TTLL3A0A0A6YYG9 625 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 MTMR1Q13613 665 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 MMEL1Q495T6 779 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 SNRNP48Q6IEG0 339 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 CYP4F22Q6NT55 531 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 RMDN3Q96TC7 470 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 SNTNA6NMZ2 147 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 K7ERI5 159 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 ZNF18P17022 549 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 GSTT1P30711 240 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 LSP1P33241 339 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 OXER1Q8TDS5 423 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 EFHD2Q96C19 240 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 RBM41Q96IZ5 413 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 EFHD1Q9BUP0 239 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 NHEJ1Q9H9Q4 299 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 CAPN11Q9UMQ6 739 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 INPP5FQ9Y2H2 1132 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 ABCC3O15438 1527 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 TYW5A2RUC4 315 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 SLC26A4O43511 780 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 FAM107AO95990 144 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 PYGBP11216 843 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 NQO1P15559 274 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 LIFRP42702 1097 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 DSTYKQ6XUX3 929 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 HNRNPLLQ8WVV9 542 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 RNF181Q9P0P0 153 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 SPATA7Q9P0W8 599 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 ATP6V1HQ9UI12 483 aa11.77□□□□□ -0.53
SMARCE1-202ENST00000348513 RCOR1Q9UKL0 485 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms