RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CC2D1AQ6P1N0 951 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 KCNV1Q6PIU1 500 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GPD1LQ8N335 351 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TMC2Q8TDI7 906 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 U2AF1L4Q8WU68 220 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SYT11Q9BT88 431 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 AZI2Q9H6S1 392 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ZNFX1Q9P2E3 1918 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 LRRIQ4A6NIV6 560 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SEC31AO94979 1220 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 H2AFZP0C0S5 128 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 NAMPTP43490 491 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 LIG4P49917 911 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 STRN3Q13033 797 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 H2AFVQ71UI9 128 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FBXO16Q8IX29 292 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 DEPTORQ8TB45 409 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FAM213AQ9BRX8 229 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TMEM8AQ9HCN3 771 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 OGFRQ9NZT2 677 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 RAB21Q9UL25 225 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 USP20Q9Y2K6 914 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ATP8B3O60423 1300 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GRID2IPA4D2P6 1211 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CCDC151A5D8V7 595 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FTCDO95954 541 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 KIF22Q14807 665 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CELF3Q5SZQ8 465 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MAP1SQ66K74 1059 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 USP37Q86T82 979 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SEMA4DQ92854 862 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GLG1Q92896 1179 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 VTI1AQ96AJ9 217 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GPR20Q99678 358 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 EFCC1Q9HA90 598 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TOPORSQ9NS56 1045 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TSKSQ9UJT2 592 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PNMA3Q9UL41 463 aa15.29■□□□□ 0.04
CDK5RAP1-202ENST00000346416 K7ERI5 159 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 NOP56O00567 594 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 DLATP10515 647 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SCP2P22307 547 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 BRD3Q15059 726 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 KCNN1Q92952 543 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 KAT5Q92993 513 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ARFGAP3Q9NP61 516 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 INTUQ9ULD6 942 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 COQ4Q9Y3A0 265 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ZNF233A6NK53 670 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MAFO75444 373 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MARK3P27448 753 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 NOP2P46087 812 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CBX1P83916 185 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MEI1Q5TIA1 1274 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TRIM50Q86XT4 487 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PPM1KQ8N3J5 372 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SHCBP1Q8NEM2 672 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FAM167AQ96KS9 214 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 STYXL1Q9Y6J8 313 aa15.28■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TMCO5BA8MYB1 307 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 EXTL3O43909 919 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GTF2H1P32780 548 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GALCP54803 685 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 DRP2Q13474 957 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CCDC62Q6P9F0 684 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SV2AQ7L0J3 742 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 DHX37Q8IY37 1157 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FBXL13Q8NEE6 735 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TAS1R2Q8TE23 839 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MORC4Q8TE76 937 aa15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 BBXQ8WY36 941 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PIGRP01833 764 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 TXNP10599 105 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 USP8P40818 1118 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 GPC3P51654 580 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 VSNL1P62760 191 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 CAPSQ13938 189 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 ZNF572Q7Z3I7 529 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 GPRC5AQ8NFJ5 357 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 COPS5Q92905 334 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 KREMEN1Q96MU8 473 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 SPATA33Q96N06 139 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 AGPAT1Q99943 283 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 KIAA1586Q9HCI6 787 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 SEPT11Q9NVA2 429 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 RAB20Q9NX57 234 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 AGO2Q9UKV8 859 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 PACSIN2Q9UNF0 486 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 A0A0A6YYK5 440 aaPredicted RBP15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 UNCXA6NJT0 531 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 PDHXO00330 501 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 LGR5O75473 907 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 DNA2P51530 1060 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 MFAP3P55082 362 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 ENPEPQ07075 957 aa15.26■□□□□ 0.03
CDK5RAP1-202ENST00000346416 C2orf54Q08AI8 447 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms