RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 ANKEF1Q9NU02 776 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 TBC1D13Q9NVG8 400 aa13.8□□□□□ -0.2
SGCA-202ENST00000344627 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
SGCA-202ENST00000344627 MEIS3P2A8K0S8 358 aa13.79□□□□□ -0.2
SGCA-202ENST00000344627 USO1O60763 962 aaKnown RBP13.79□□□□□ -0.2
SGCA-202ENST00000344627 NR1I2O75469 434 aa13.79□□□□□ -0.2
SGCA-202ENST00000344627 DGAT1O75907 488 aa13.79□□□□□ -0.2
SGCA-202ENST00000344627 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
SGCA-202ENST00000344627 CABP7Q86V35 215 aa13.79□□□□□ -0.2
SGCA-202ENST00000344627 KREMEN2Q8NCW0 462 aa13.79□□□□□ -0.2
SGCA-202ENST00000344627 PRSS33Q8NF86 280 aa13.79□□□□□ -0.2
SGCA-202ENST00000344627 APOL5Q9BWW9 433 aa13.79□□□□□ -0.2
SGCA-202ENST00000344627 FOXP1Q9H334 677 aaPredicted RBP13.79□□□□□ -0.2
SGCA-202ENST00000344627 NRDE2Q9H7Z3 1164 aa13.79□□□□□ -0.2
SGCA-202ENST00000344627 DBR1Q9UK59 544 aaKnown RBP13.79□□□□□ -0.2
SGCA-202ENST00000344627 NOL7Q9UMY1 257 aaKnown RBP13.79□□□□□ -0.2
SGCA-202ENST00000344627 INPPL1O15357 1258 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 LYPLA2O95372 231 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 NCLP19338 710 aaKnown RBP13.78□□□□□ -0.2
SGCA-202ENST00000344627 RARRES1P49788 294 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 OTOP3Q7RTS5 596 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 CMASQ8NFW8 434 aaPredicted RBP13.78□□□□□ -0.2
SGCA-202ENST00000344627 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 SLC22A17Q8WUG5 538 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 HDAC7Q8WUI4 952 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 CPB2Q96IY4 423 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 APOL6Q9BWW8 343 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 TRIM6Q9C030 488 aaPredicted RBP13.78□□□□□ -0.2
SGCA-202ENST00000344627 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
SGCA-202ENST00000344627 POMKQ9H5K3 350 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 RSAD1Q9HA92 442 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 XPNPEP1Q9NQW7 623 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 MRPL17Q9NRX2 175 aaKnown RBP13.78□□□□□ -0.2
SGCA-202ENST00000344627 FAN1Q9Y2M0 1017 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 ZMYM2Q9UBW7 1377 aa13.78□□□□□ -0.2
SGCA-202ENST00000344627 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 POMCP01189 267 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 OR52Z1P0C646 297 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 XRCC6P12956 609 aaKnown RBP eCLIP13.77□□□□□ -0.21
SGCA-202ENST00000344627 ITGA4P13612 1032 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 HOXA11P31270 313 aaPredicted RBP13.77□□□□□ -0.21
SGCA-202ENST00000344627 CLCN5P51795 746 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 PTENP60484 403 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 TCF15Q12870 199 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 TMEM132AQ24JP5 1023 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 NOTUMQ6P988 496 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 AGMOQ6ZNB7 445 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 CCDC149Q6ZUS6 474 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 GPR149Q86SP6 731 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 CATSPER3Q86XQ3 398 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
SGCA-202ENST00000344627 AUTS2Q8WXX7 1259 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 STAMQ92783 540 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 NACC1Q96RE7 527 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 NFKBIZQ9BYH8 718 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 UPF2Q9HAU5 1272 aaKnown RBP13.77□□□□□ -0.21
SGCA-202ENST00000344627 TUFT1Q9NNX1 390 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 DNAJB4Q9UDY4 337 aa13.77□□□□□ -0.21
SGCA-202ENST00000344627 TECTAO75443 2155 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 ARHGEF35A5YM69 484 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 C2CD4DB7Z1M9 353 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 PROB1E7EW31 1015 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
SGCA-202ENST00000344627 TSPAN1O60635 241 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 MED24O75448 989 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 SOD2P04179 222 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 SPATA31C1P0DKV0 1188 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 GLRA2P23416 452 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 KLRC2P26717 231 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 ARL2P36404 184 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 CREMQ03060 361 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 CAPSQ13938 189 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 PTPN14Q15678 1187 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 UBXN11Q5T124 520 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 IER5LQ5T953 404 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 MCTP1Q6DN14 999 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 NOSTRINQ8IVI9 506 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 KIF2CQ99661 725 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 EIF2AQ9BY44 585 aaKnown RBP13.76□□□□□ -0.21
SGCA-202ENST00000344627 GPRC5CQ9NQ84 441 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.76□□□□□ -0.21
SGCA-202ENST00000344627 IGSF9Q9P2J2 1179 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 ZNF318Q5VUA4 2279 aa13.76□□□□□ -0.21
SGCA-202ENST00000344627 SSBP05455 408 aaKnown RBP eCLIP13.75□□□□□ -0.21
SGCA-202ENST00000344627 URODP06132 367 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 ADH1AP07327 375 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 LIG1P18858 919 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 CCT6AP40227 531 aaKnown RBP13.75□□□□□ -0.21
SGCA-202ENST00000344627 SLC11A1P49279 550 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 CLCN4P51793 760 aa13.75□□□□□ -0.21
SGCA-202ENST00000344627 MBTD1Q05BQ5 628 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms