RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TAB3Q8N5C8 712 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 HVCN1Q96D96 273 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 INTS2Q9H0H0 1204 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 VTA1Q9NP79 307 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 IL18RAPO95256 599 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 SLC4A1P02730 911 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 ARP10275 920 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 NOTUMQ6P988 496 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 REM2Q8IYK8 340 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 CCHCR1Q8TD31 782 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 TRIM9Q9C026 710 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 COL14A1Q05707 1796 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 MUTP22033 750 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 ADORA2BP29275 332 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 METTL7BQ6UX53 244 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 SLC30A10Q6XR72 485 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 C17orf75Q9HAS0 396 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 TRPC7Q9HCX4 862 aa17.55■□□□□ 0.4
SMARCA4-201ENST00000344626 GMNNO75496 209 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 VPS41P49754 854 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 CACNB2Q08289 660 aaPredicted RBP17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.54■□□□□ 0.41e-7■■■■■ 40.8
SMARCA4-201ENST00000344626 KLK14Q9P0G3 267 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 SYNGAP1Q96PV0 1343 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 GHRP10912 638 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 GARSP41250 739 aaKnown RBP17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 SLC26A2P50443 739 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 CDO1Q16878 200 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 TRIM72Q6ZMU5 477 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 IFT172Q9UG01 1749 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 SLC15A5A6NIM6 579 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 F8W8V4 182 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 ZC3H11AO75152 810 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 VTNP04004 478 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 RASGRP2Q7LDG7 609 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 NKX2-3Q8TAU0 364 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 PBKQ96KB5 322 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 ENTPD7Q9NQZ7 604 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 RNF14Q9UBS8 474 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 LRRD1A4D1F6 860 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 M0QYV0 167 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 SART1O43290 800 aaKnown RBP17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 ARHGEF18Q6ZSZ5 1173 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 MAGOHBQ96A72 148 aaKnown RBP17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 JRKLQ9Y4A0 524 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 PCDHA13Q9Y5I0 950 aa17.54■□□□□ 0.4
SMARCA4-201ENST00000344626 A6NNZ2 444 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 PRR29P0C7W0 189 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 TMEM132DQ14C87 1099 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 TUBB8Q3ZCM7 444 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 PCNX4Q63HM2 1172 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 ADAT2Q7Z6V5 191 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 REEP2Q9BRK0 252 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 IGSF9BQ9UPX0 1349 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 I3L4J1 428 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 ALDH5A1P51649 535 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 TADA2BQ86TJ2 420 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 IL25Q9H293 177 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 SGO2Q562F6 1265 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 GJC2Q5T442 439 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 ATF7IP2Q5U623 682 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 DARS2Q6PI48 645 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 HSPBP1Q9NZL4 362 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 VPS18Q9P253 973 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 NPTXRO95502 500 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 RALAP11233 206 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 GTF2F1P35269 517 aaKnown RBP eCLIP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 SREBF1P36956 1147 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 COG7P83436 770 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 RWDD4Q6NW29 188 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 SEPT5Q99719 369 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 EHD2Q9NZN4 543 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 MSH4O15457 936 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 B3GAT3O94766 335 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 ZBTB48P10074 688 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 TGFB3P10600 412 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 BTG3Q14201 252 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 LLGL1Q15334 1064 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 STILQ15468 1287 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 SPATA2LQ8IUW3 424 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 VPS52Q8N1B4 723 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 APPL2Q8NEU8 664 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 OSMRQ99650 979 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 MAD1L1Q9Y6D9 718 aa17.53■□□□□ 0.4
SMARCA4-201ENST00000344626 AOC2O75106 756 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 GNA15P30679 374 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 DNAJC21Q5F1R6 531 aaKnown RBP17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 PLCD4Q9BRC7 762 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 WDR18Q9BV38 432 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 PITPNM2Q9BZ72 1349 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 GRIK1P39086 918 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 NNMTP40261 264 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 CCL23P55773 120 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 IQSEC1Q6DN90 963 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 APBA2Q99767 749 aa17.52■□□□□ 0.4
SMARCA4-201ENST00000344626 TARS2Q9BW92 718 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms