RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 PKN1Q16512 942 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 RABL6Q3YEC7 729 aaPredicted RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 OR6B2Q6IFH4 312 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 DNAJC24Q6P3W2 148 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 SREK1Q8WXA9 508 aaKnown RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 CHMP2BQ9UQN3 213 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 ASCC3Q8N3C0 2202 aaKnown RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 PSMD14O00487 310 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 DKC1O60832 514 aaKnown RBP eCLIP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 RNF8O76064 485 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 CBX6O95503 412 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 ARL6IP4Q66PJ3 421 aaKnown RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 INTS2Q9H0H0 1204 aaKnown RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 KCNQ5Q9NR82 932 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 TOPORSQ9NS56 1045 aaPredicted RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 BANF1O75531 89 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 MT-CO1P00395 513 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 NPEPPSP55786 919 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 SLC27A3Q5K4L6 730 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 ZBTB41Q5SVQ8 909 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 ZNF571Q7Z3V5 609 aaPredicted RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 JAMLQ86YT9 394 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 DEPDC1BQ8WUY9 529 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 NSUN4Q96CB9 384 aaKnown RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 LZTS2Q9BRK4 669 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 RUSC1Q9BVN2 902 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 ZNF233A6NK53 670 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 FOXN3O00409 490 aaPredicted RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 FAM107AO95990 144 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 CPP00450 1065 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 PSMA2P25787 234 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 RGS7P49802 495 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 SEPT6Q14141 434 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 DLGAP5Q15398 846 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 RABGAP1LQ5R372 815 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 LLGL2Q6P1M3 1020 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 MED10Q9BTT4 135 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 IL1RL2Q9HB29 575 aa8.31□□□□□ -1.08
KPNA1-201ENST00000344337 TYW1Q9NV66 732 aaKnown RBP8.31□□□□□ -1.08
KPNA1-201ENST00000344337 GRID2IPA4D2P6 1211 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 STXBP3O00186 592 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 HNRNPCP07910 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 CTCFP49711 727 aaPredicted RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 VAMP7P51809 220 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 TROAPQ12815 778 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 C3orf67Q6ZVT6 689 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 FERMT1Q9BQL6 677 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 CAPN9O14815 690 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 LPXNO60711 386 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 SGPL1O95470 568 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 BMP3P12645 472 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 ETS2P15036 469 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 PHBP35232 272 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 ITGA8P53708 1063 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 RCN1Q15293 331 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 SHROOM1Q2M3G4 852 aaPredicted RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 TTI2Q6NXR4 508 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 NCAPG2Q86XI2 1143 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 GIMAP8Q8ND71 665 aaPredicted RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 SPDYE1Q8NFV5 336 aaPredicted RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 ISCA1Q9BUE6 129 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 STK17AQ9UEE5 414 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 DENND3A2RUS2 1198 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 CASQ2O14958 399 aaPredicted RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 APRTP07741 180 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 ZSCAN5DPP0CG00 497 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 CYP19A1P11511 503 aaPredicted RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 SESN2P58004 480 aaPredicted RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 COBLL1Q53SF7 1204 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 THEMIS2Q5TEJ8 643 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 SYDE2Q5VT97 1194 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 SPOPLQ6IQ16 392 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 WDR59Q6PJI9 974 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 LVRNQ6Q4G3 990 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 SPATS2Q86XZ4 545 aaKnown RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 CREG2Q8IUH2 290 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 ARHGAP24Q8N264 748 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 NMD3Q96D46 503 aaKnown RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 TRIM56Q9BRZ2 755 aaKnown RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 FBXO28Q9NVF7 368 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 TAS2R14Q9NYV8 317 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 USP42Q9H9J4 1324 aaKnown RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 TET3O43151 1660 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 ANO9A1A5B4 782 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 MEI4A8MW99 385 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 XPO1O14980 1071 aaKnown RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 TPST1O60507 370 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 WEE2P0C1S8 567 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 ERVK-9P63128 1117 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 POU5F1BQ06416 359 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 KCNB1Q14721 858 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 ZKSCAN4Q969J2 545 aaPredicted RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 PLEKHG1Q9ULL1 1385 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 PRRC2BQ5JSZ5 2229 aaKnown RBP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 H0YIN7 160 aa8.3□□□□□ -1.08
KPNA1-201ENST00000344337 SMNDC1O75940 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
KPNA1-201ENST00000344337 KCNA3P22001 575 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms