RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 C12orf56Q8IXR9 622 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 KREMEN1Q96MU8 473 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 PCDHB18PQ96TA0 734 aa16.08■□□□□ 0.16
VIPAS39-202ENST00000343765 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 RGPD4Q7Z3J3 1758 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 NR3C2P08235 984 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 DLATP10515 647 aaKnown RBP16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 PDCLQ13371 301 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 WRNIP1Q96S55 665 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 USP20Q9Y2K6 914 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 ALG6Q9Y672 507 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 CENPFP49454 3210 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 ZNF862O60290 1169 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 CALCAP01258 141 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 CCND2P30279 289 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 SFNP31947 248 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 HSD17B3P37058 310 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 CUL1Q13616 776 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 MESDQ14696 234 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 DLK2Q6UY11 383 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 MREGQ8N565 214 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 CCDC26Q8TAB7 109 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 EPS8L1Q8TE68 723 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 KRT35Q92764 455 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 MOV10L1Q9BXT6 1211 aaKnown RBP16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 PCDHA10Q9Y5I2 948 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 FER1L6Q2WGJ9 1857 aa16.07■□□□□ 0.16
VIPAS39-202ENST00000343765 LOXHD1Q8IVV2 1947 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 NFKBIEO00221 500 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 SHOX2O60902 331 aaPredicted RBP16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 MMEP08473 750 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 ZNF280AP59817 542 aaPredicted RBP16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 SWSAP1Q6NVH7 229 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 CPNE8Q86YQ8 564 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 POMGNT1Q8WZA1 660 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 DHX38Q92620 1227 aaKnown RBP16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 BTBD6Q96KE9 485 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 IWS1Q96ST2 819 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 EXOC7Q9UPT5 735 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 RRP15Q9Y3B9 282 aaKnown RBP16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 P4HA2O15460 535 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 HSPA9P38646 679 aaKnown RBP16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 BACE1P56817 501 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 UBLCP1Q8WVY7 318 aaPredicted RBP16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 BICD1Q96G01 975 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 SLITRK6Q9H5Y7 841 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 ANKEF1Q9NU02 776 aa16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 SEPT9Q9UHD8 586 aaPredicted RBP16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 CNOT7Q9UIV1 285 aaKnown RBP16.06■□□□□ 0.16
VIPAS39-202ENST00000343765 CHRNB2P17787 502 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 SF3B2Q13435 895 aaKnown RBP16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 MAP4K3Q8IVH8 894 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 RHOT2Q8IXI1 618 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 TAS1R2Q8TE23 839 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 GLG1Q92896 1179 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 PI4K2AQ9BTU6 479 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 ST6GALNAC4Q9H4F1 302 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 MAP3K20Q9NYL2 800 aaKnown RBP16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 UTP11Q9Y3A2 253 aaKnown RBP16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 ADGRA3Q8IWK6 1321 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 PFASO15067 1338 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 HNRNPDLO14979 420 aaKnown RBP16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 ZEB2O60315 1214 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 PPFIA4O75335 1185 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 GPC5P78333 572 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 UAP1Q16222 522 aaPredicted RBP16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 SLC39A4Q6P5W5 647 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 SRLQ86TD4 932 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 VSIG10LQ86VR7 867 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 PARD3BQ8TEW8 1205 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 TIPINQ9BVW5 301 aa16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 NOCTQ9UK39 431 aaKnown RBP16.05■□□□□ 0.16
VIPAS39-202ENST00000343765 GRIN2DO15399 1336 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 TRIM66O15016 1216 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 PEX10O60683 326 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 CTNNA1P35221 906 aaKnown RBP16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 LLGL1Q15334 1064 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 LMBRD2Q68DH5 695 aaPredicted RBP16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 KRT39Q6A163 491 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 FAM71AQ8IYT1 594 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 ZNF280CQ8ND82 737 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 CARD9Q9H257 536 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 RGS20O76081 388 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 COMTP21964 271 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 HPDP32754 393 aaPredicted RBP16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 CCT5P48643 541 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 MFAP3P55082 362 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 PRKG1Q13976 671 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 C10orf67Q8IYJ2 551 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 BCAS4Q8TDM0 211 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 FAM213AQ9BRX8 229 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 DAAM1Q9Y4D1 1078 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 GOLGA6L10A0A0M3HER8 536 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 RTN2O75298 545 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 KRT5P13647 590 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 BAG6P46379 1132 aa16.04■□□□□ 0.16
VIPAS39-202ENST00000343765 DR1Q01658 176 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms