RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 RFX1P22670 979 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 POLGP54098 1239 aaPredicted RBP10.38□□□□□ -0.75
HOXA1-201ENST00000343060 STRN3Q13033 797 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 MOXD1Q6UVY6 613 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 RGS9BPQ6ZS82 235 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 PALB2Q86YC2 1186 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 SLC13A5Q86YT5 568 aaPredicted RBP10.38□□□□□ -0.75
HOXA1-201ENST00000343060 RTFDC1Q9BY42 306 aaPredicted RBP10.38□□□□□ -0.75
HOXA1-201ENST00000343060 WNT8AQ9H1J5 351 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 LRRC19Q9H756 370 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 EURLQ9NYK6 297 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 THRAP3Q9Y2W1 955 aaKnown RBP10.38□□□□□ -0.75
HOXA1-201ENST00000343060 STARD13Q9Y3M8 1113 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 COL24A1Q17RW2 1714 aa10.38□□□□□ -0.75
HOXA1-201ENST00000343060 GH1P01241 217 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 GM2AP17900 193 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 TNFAIP3P21580 790 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 GCLCP48506 637 aaPredicted RBP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 FMO5P49326 533 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 THEMIS2Q5TEJ8 643 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 PPP1R21Q6ZMI0 780 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 ARHGEF18Q6ZSZ5 1173 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 OTUD6AQ7L8S5 288 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 APBB1IPQ7Z5R6 666 aaPredicted RBP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 MAPKAPK5Q8IW41 473 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 FAM13CQ8NE31 585 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 IFT43Q96FT9 208 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 MYLK2Q9H1R3 596 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 OLFML3Q9NRN5 406 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 SAP30BPQ9UHR5 308 aaKnown RBP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 MTUS1Q9ULD2 1270 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 FRMPD2Q68DX3 1309 aaPredicted RBP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 LRRD1A4D1F6 860 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 RGL2O15211 777 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 EIF3DO15371 548 aaKnown RBP eCLIP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 TGFB1I1O43294 461 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 TTC4O95801 387 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 BRAFP15056 766 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 CNGA1P29973 690 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 PAPOLAP51003 745 aaKnown RBP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 RPS8P62241 208 aaKnown RBP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 CALCOCO2Q13137 446 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 MOGSQ13724 837 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 SLC15A2Q16348 729 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 TXNRD3Q86VQ6 643 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 GALNT15Q8N3T1 639 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 ANKRD42Q8N9B4 389 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 TSC22D3Q99576 134 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 TLE6Q9H808 572 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 JMJD4Q9H9V9 463 aa10.37□□□□□ -0.75
HOXA1-201ENST00000343060 CPSF2Q9P2I0 782 aaKnown RBP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 ZMYND8Q9ULU4 1186 aaPredicted RBP10.37□□□□□ -0.75
HOXA1-201ENST00000343060 SPATA31A5Q5VU36 1347 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 SPATA31A6Q5VVP1 1343 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 SPATA31A7Q8IWB4 1347 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 IGKV6D-41A0A0C4DH26 115 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 MARCH6O60337 910 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 ECE2O60344 883 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 ECEL1O95672 775 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 FOXN2P32314 431 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 STX2P32856 288 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 PSMC2P35998 433 aaKnown RBP10.36□□□□□ -0.75
HOXA1-201ENST00000343060 RAD23BP54727 409 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 TRAF1Q13077 416 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 BICDL1Q6ZP65 573 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 INTS8Q75QN2 995 aaKnown RBP10.36□□□□□ -0.75
HOXA1-201ENST00000343060 CATSPER3Q86XQ3 398 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 CCDC105Q8IYK2 499 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 FAM186BQ8IYM0 893 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 SLFN12Q8IYM2 578 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 CNBD1Q8NA66 436 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 GDAP1Q8TB36 358 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 FAM136AQ96C01 138 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 SLC7A6OSQ96CW6 309 aaPredicted RBP10.36□□□□□ -0.75
HOXA1-201ENST00000343060 AGPAT1Q99943 283 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 INTS2Q9H0H0 1204 aaKnown RBP10.36□□□□□ -0.75
HOXA1-201ENST00000343060 ZHX3Q9H4I2 956 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 APEX2Q9UBZ4 518 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 USP20Q9Y2K6 914 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 TCRBV7S2A1N4TA0A589 114 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 MPHOSPH10O00566 681 aaKnown RBP10.36□□□□□ -0.75
HOXA1-201ENST00000343060 ACSL3O95573 720 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 LDHCP07864 332 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 SPATA31C1P0DKV0 1188 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 PYGMP11217 842 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 COMTP21964 271 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 RPA1P27694 616 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 TUBP50607 506 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 RPS6KA3P51812 740 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 ITPK1Q13572 414 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 SLC5A9Q2M3M2 681 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 SYDE1Q6ZW31 735 aaPredicted RBP10.36□□□□□ -0.75
HOXA1-201ENST00000343060 RELL1Q8IUW5 271 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 ETNPPLQ8TBG4 499 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 CRYGNQ8WXF5 182 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 PAPOLBQ9NRJ5 636 aaKnown RBP10.36□□□□□ -0.75
HOXA1-201ENST00000343060 CHKBQ9Y259 395 aa10.36□□□□□ -0.75
HOXA1-201ENST00000343060 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms