RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 TAF8Q7Z7C8 310 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 SULF1Q8IWU6 871 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 ATP11CQ8NB49 1132 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 UBE2OQ9C0C9 1292 aaKnown RBP18.6■□□□□ 0.57
SMAD4-201ENST00000342988 RNPEPQ9H4A4 650 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 PPIP5K1Q6PFW1 1433 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 ATP10DQ9P241 1426 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 FKBP9O95302 570 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 LDHAP00338 332 aaKnown RBP18.6■□□□□ 0.57
SMAD4-201ENST00000342988 RAB2AP61019 212 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 FKBP9P1Q75LS8 142 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 LRRC8DQ7L1W4 858 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 ZNF654Q8IZM8 581 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 DCTN4Q9UJW0 460 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 FOSL2P15408 326 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 CMA1P23946 247 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 SPACA6W5XKT8 324 aa18.6■□□□□ 0.57
SMAD4-201ENST00000342988 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 TNNI3KQ59H18 835 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 TCEAL5Q5H9L2 206 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 RNF135Q8IUD6 432 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 KCNJ14Q9UNX9 436 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 FPGT-TNNI3KV9GXZ4 949 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 KCNQ4P56696 695 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 TRIM25Q14258 630 aaKnown RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 ASPRV1Q53RT3 343 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 XAGE2Q96GT9 111 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 ZWILCHQ9H900 591 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 AFF4Q9UHB7 1163 aaKnown RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 PCDHA13Q9Y5I0 950 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 EMILIN1Q9Y6C2 1016 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 MIF4GDA9UHW6 222 aaKnown RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 HIST1H2AGP0C0S8 130 aaPredicted RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 HIST1H2ADP20671 130 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 KCNA3P22001 575 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 ACCSLQ4AC99 568 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 TRPM8Q7Z2W7 1104 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 ATP8B4Q8TF62 1192 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 HIST1H2AHQ96KK5 128 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 HIST1H2AJQ99878 128 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 H2AFJQ9BTM1 129 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 ERN1O75460 977 aaKnown RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 WARSP23381 471 aaKnown RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 SERPINB3P29508 390 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 PPIDQ08752 370 aaKnown RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 GGPS1O95749 300 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 ARPP19P56211 112 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 TAP1Q03518 808 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 DPYDQ12882 1025 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 ANO4Q32M45 955 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 GPATCH4Q5T3I0 446 aaKnown RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 DSTYKQ6XUX3 929 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 HDHD2Q9H0R4 259 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 ETNK1Q9HBU6 452 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 IL1RAPL1Q9NZN1 696 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 NXF1Q9UBU9 619 aaKnown RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 PSMD3O43242 534 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 MAGEA10P43363 369 aaPredicted RBP18.59■□□□□ 0.57
SMAD4-201ENST00000342988 PPP2R2AP63151 447 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 FAM227BQ96M60 508 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 TRPC7Q9HCX4 862 aa18.59■□□□□ 0.57
SMAD4-201ENST00000342988 LCA5LO95447 670 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 PDAP1Q13442 181 aaKnown RBP18.58■□□□□ 0.57
SMAD4-201ENST00000342988 PDZK1Q5T2W1 519 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 KLHL25Q9H0H3 589 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 KLC4Q9NSK0 619 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 UBA6A0AVT1 1052 aaPredicted RBP18.58■□□□□ 0.57
SMAD4-201ENST00000342988 FAM170AA1A519 330 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 UNC45BQ8IWX7 931 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 C18orf25Q96B23 403 aaPredicted RBP18.58■□□□□ 0.57
SMAD4-201ENST00000342988 REXO4Q9GZR2 422 aaKnown RBP18.58■□□□□ 0.57
SMAD4-201ENST00000342988 ENC1O14682 589 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 SETD3Q86TU7 594 aaPredicted RBP18.58■□□□□ 0.57
SMAD4-201ENST00000342988 SLC13A1Q9BZW2 595 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 ZNF304Q9HCX3 659 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 FANCLQ9NW38 375 aa18.58■□□□□ 0.57
SMAD4-201ENST00000342988 DARSP14868 501 aaKnown RBP18.58■□□□□ 0.56
SMAD4-201ENST00000342988 TFDP2Q14188 446 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 OR6B2Q6IFH4 312 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 MB21D1Q8N884 522 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 KCNK16Q96T55 309 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 CNPY3Q9BT09 278 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 LRRC63Q05C16 580 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 DCAF4L1Q3SXM0 396 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 WDR60Q8WVS4 1066 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 SYMPKQ92797 1274 aaKnown RBP18.58■□□□□ 0.56
SMAD4-201ENST00000342988 STK32BQ9NY57 414 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 SERPIND1P05546 499 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 KRT20P35900 424 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 CYP4A11Q02928 519 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 PTGDRQ13258 359 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 CYP4A22Q5TCH4 519 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 NT5DC4Q86YG4 428 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 PIDD1Q9HB75 910 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 AVENQ9NQS1 362 aaPredicted RBP18.58■□□□□ 0.56
SMAD4-201ENST00000342988 RWDD2AQ9UIY3 292 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 GFPT2O94808 682 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 PIK3R1P27986 724 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.56
SMAD4-201ENST00000342988 TOM1O60784 492 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms