RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 SDCCAG8Q86SQ7 713 aaPredicted RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 TRIM50Q86XT4 487 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 DAGLBQ8NCG7 672 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 ATG4AQ8WYN0 398 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 ANKRD36BP1Q96IX9 119 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 MRPL47Q9HD33 250 aaKnown RBP12.8□□□□□ -0.36
CDH5-201ENST00000341529 AGPAT3Q9NRZ7 376 aa12.8□□□□□ -0.36
CDH5-201ENST00000341529 ARHGAP42A6NI28 874 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 RASA4BC9J798 803 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 H0YCG3 227 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 RASA4O43374 803 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 CALCAP01258 141 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 LONRF1Q17RB8 773 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 SCYL3Q8IZE3 742 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 STK33Q9BYT3 514 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 TMEM117Q9H0C3 514 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 UNC45AQ9H3U1 944 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 DCTN4Q9UJW0 460 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 AGO2Q9UKV8 859 aaKnown RBP12.79□□□□□ -0.36
CDH5-201ENST00000341529 CSPG5O95196 566 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 MAP3K6O95382 1288 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 TROVE2P10155 538 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDH5-201ENST00000341529 NFX1Q12986 1120 aaKnown RBP12.79□□□□□ -0.36
CDH5-201ENST00000341529 ORC2Q13416 577 aaPredicted RBP12.79□□□□□ -0.36
CDH5-201ENST00000341529 EDRF1Q3B7T1 1238 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 NLRP14Q86W24 1093 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 SYT2Q8N9I0 419 aaPredicted RBP12.79□□□□□ -0.36
CDH5-201ENST00000341529 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 DHX38Q92620 1227 aaKnown RBP12.79□□□□□ -0.36
CDH5-201ENST00000341529 CFAP36Q96G28 342 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 RNF181Q9P0P0 153 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 STAMBPO95630 424 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 P4HA1P13674 534 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 BRAFP15056 766 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 RHBDL3P58872 404 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 KRT76Q01546 638 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 STXBP2Q15833 593 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 ZC3H18Q86VM9 953 aaKnown RBP12.79□□□□□ -0.36
CDH5-201ENST00000341529 ELOA2Q8IYF1 753 aaPredicted RBP12.79□□□□□ -0.36
CDH5-201ENST00000341529 LRRC71Q8N4P6 559 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 MCPH1Q8NEM0 835 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 SLC20A1Q8WUM9 679 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 CASKIN2Q8WXE0 1202 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
CDH5-201ENST00000341529 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
CDH5-201ENST00000341529 CSDE1O75534 798 aaKnown RBP12.78□□□□□ -0.36
CDH5-201ENST00000341529 ORC1Q13415 861 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 USP38Q8NB14 1042 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 PYROXD1Q8WU10 500 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 CDHR1Q96JP9 859 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 EDEM3Q9BZQ6 932 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 EFCC1Q9HA90 598 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 FNDC3AQ9Y2H6 1198 aaKnown RBP12.78□□□□□ -0.36
CDH5-201ENST00000341529 GRAP2O75791 330 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 PPP1R37O75864 691 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 PPP2R2AP63151 447 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 GPS1Q13098 491 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 MAPK6Q16659 721 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 WDR59Q6PJI9 974 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 SRLQ86TD4 932 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 ANKMY2Q8IV38 441 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 ZNF384Q8TF68 577 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 P3H4Q92791 437 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 MYO3BQ8WXR4 1341 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 MIF4GDA9UHW6 222 aaKnown RBP12.78□□□□□ -0.36
CDH5-201ENST00000341529 KLRC4O43908 158 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 WEE2P0C1S8 567 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 PLS3P13797 630 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 PEX19P40855 299 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 PDE1BQ01064 536 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 IL9RQ01113 521 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 KRT17Q04695 432 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 KYNUQ16719 465 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 SUPT20HL1Q3ZLR7 823 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 MMS22LQ6ZRQ5 1243 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 PPFIBP2Q8ND30 876 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 SREK1Q8WXA9 508 aaKnown RBP12.78□□□□□ -0.36
CDH5-201ENST00000341529 TTC17Q96AE7 1141 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 MIS12Q9H081 205 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 CNOT7Q9UIV1 285 aaKnown RBP12.78□□□□□ -0.36
CDH5-201ENST00000341529 IFT172Q9UG01 1749 aa12.78□□□□□ -0.36
CDH5-201ENST00000341529 TARSL2A2RTX5 802 aaKnown RBP12.77□□□□□ -0.36
CDH5-201ENST00000341529 FAM153BP0C7A2 387 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 JAK3P52333 1124 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 SLMAPQ14BN4 828 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 ZNF699Q32M78 642 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 FAM153CQ494X1 144 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 APOBEC3HQ6NTF7 200 aaKnown RBP12.77□□□□□ -0.36
CDH5-201ENST00000341529 IRF2BP1Q8IU81 584 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 KLF6Q99612 283 aaPredicted RBP12.77□□□□□ -0.36
CDH5-201ENST00000341529 FGFBP2Q9BYJ0 223 aa12.77□□□□□ -0.36
CDH5-201ENST00000341529 FAM153AQ9UHL3 310 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms