RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TAF3Q5VWG9 929 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 TRMT1LQ7Z2T5 733 aaKnown RBP16.27■□□□□ 0.2
TPM3-208ENST00000341485 RASAL3Q86YV0 1011 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 RDH13Q8NBN7 331 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 AFAP1L1Q8TED9 768 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 PBKQ96KB5 322 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 SYT11Q9BT88 431 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 GABBR1Q9UBS5 961 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 TMEM59LQ9UK28 342 aa16.27■□□□□ 0.2
TPM3-208ENST00000341485 DBR1Q9UK59 544 aaKnown RBP16.27■□□□□ 0.2
TPM3-208ENST00000341485 DOCK5Q9H7D0 1870 aa16.27■□□□□ 0.19
TPM3-208ENST00000341485 DNAJC25-GNG10A0A024R161 153 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 TISP43B9A030 160 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 RARRES1P49788 294 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 GALCP54803 685 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 ACTR2P61160 394 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 MYBPC2Q14324 1141 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 MIS18BP1Q6P0N0 1132 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 CYFIP1Q7L576 1253 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 SLFN11Q7Z7L1 901 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 IFT20Q8IY31 132 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 ATP6V0A1Q93050 837 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 PTPN18Q99952 460 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 PLEKHA4Q9H4M7 779 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 EPB41L5Q9HCM4 733 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 STXBP5LQ9Y2K9 1186 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 IVNS1ABPQ9Y6Y0 642 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 MAPTP10636 758 aaKnown RBP16.26■□□□□ 0.19
TPM3-208ENST00000341485 CAPN2P17655 700 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 ACTN2P35609 894 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 CARSP49589 748 aaKnown RBP16.26■□□□□ 0.19
TPM3-208ENST00000341485 SP2Q02086 613 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 GUCY2DQ02846 1103 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 GLYCTKQ8IVS8 523 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 LMO3Q8TAP4 145 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 PCIF1Q9H4Z3 704 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 MORF4L1Q9UBU8 362 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 APEX2Q9UBZ4 518 aa16.26■□□□□ 0.19
TPM3-208ENST00000341485 ESYT3A0FGR9 886 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 DLG4P78352 724 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 NNTQ13423 1086 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 ZSCAN26Q16670 478 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 PHLDB3Q6NSJ2 640 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 SWSAP1Q6NVH7 229 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 METTL13Q8N6R0 699 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 CASKIN2Q8WXE0 1202 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 FGD4Q96M96 766 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 LARSQ9P2J5 1176 aaKnown RBP16.25■□□□□ 0.19
TPM3-208ENST00000341485 LRRC37A2A6NM11 1700 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 NCANO14594 1321 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 ZNFX1Q9P2E3 1918 aaKnown RBP16.25■□□□□ 0.19
TPM3-208ENST00000341485 TMEM150BA6NC51 233 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 MANSC4A6NHS7 340 aaPredicted RBP16.25■□□□□ 0.19
TPM3-208ENST00000341485 BACH1O14867 736 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 RAD51CO43502 376 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 CEP104O60308 925 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 PLS3P13797 630 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 UBA1P22314 1058 aaKnown RBP16.25■□□□□ 0.19
TPM3-208ENST00000341485 NPEPPSP55786 919 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 TNNC1P63316 161 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 ALCAMQ13740 583 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 NEDD9Q14511 834 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 XKR9Q5GH70 373 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 RGMBQ6NW40 437 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 OTUD6AQ7L8S5 288 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 ACTRT1Q8TDG2 376 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 ACCSQ96QU6 501 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 SH2D3AQ9BRG2 576 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 TMEM206Q9H813 350 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 ANKEF1Q9NU02 776 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 NFU1Q9UMS0 254 aa16.25■□□□□ 0.19
TPM3-208ENST00000341485 EMSYQ7Z589 1322 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 ASB14A6NK59 587 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 FAM153BP0C7A2 387 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 TGFB3P10600 412 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 KRT13P13646 458 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 PAK2Q13177 524 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 ARHGAP44Q17R89 818 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 FAM153CQ494X1 144 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 ABHD15Q6UXT9 468 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 PEX26Q7Z412 305 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 KLHL7Q8IXQ5 586 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 SCFD2Q8WU76 684 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 LMBR1Q8WVP7 490 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 SH3GL2Q99962 352 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 CBWD1Q9BRT8 395 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 GPBP1L1Q9HC44 474 aaPredicted RBP16.24■□□□□ 0.19
TPM3-208ENST00000341485 SUCLA2Q9P2R7 463 aaPredicted RBP16.24■□□□□ 0.19
TPM3-208ENST00000341485 FAM153AQ9UHL3 310 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 DAAM1Q9Y4D1 1078 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 PLXNB2O15031 1838 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 IGSF9BQ9UPX0 1349 aa16.24■□□□□ 0.19
TPM3-208ENST00000341485 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 TMCO5BA8MYB1 307 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 SUPT20HL2P0C7V6 817 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 ADORA2AP29274 412 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 PPP3CAQ08209 521 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
TPM3-208ENST00000341485 FAM110CQ1W6H9 321 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms