RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 ADGRB1O14514 1584 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 SPDYE16A6NNV3 312 aaPredicted RBP13.71□□□□□ -0.21
DNMT1-201ENST00000340748 HERVK_113P62684 666 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 ENOSF1Q7L5Y1 443 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 ANAPC7Q9UJX3 599 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 PRR12Q9ULL5 1215 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 PLAAQ9Y263 795 aa13.71□□□□□ -0.21
DNMT1-201ENST00000340748 POTEFA5A3E0 1075 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 TDP2O95551 362 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 POTEIP0CG38 1075 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 STAG3L1P0CL83 205 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 GCLMP48507 274 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 TSPY1Q01534 308 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 PPIL2Q13356 520 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 THOC5Q13769 683 aaKnown RBP13.71□□□□□ -0.22
DNMT1-201ENST00000340748 VGLL4Q14135 290 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 POTEGQ6S5H5 508 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 POTEEQ6S8J3 1075 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 HVCN1Q96D96 273 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 TLK1Q9UKI8 766 aa13.71□□□□□ -0.22
DNMT1-201ENST00000340748 IL1R1P14778 569 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 SLCO1A2P46721 670 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 DACT2Q5SW24 774 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 TXNRD3Q86VQ6 643 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 EIF2AK1Q9BQI3 630 aaKnown RBP13.7□□□□□ -0.22
DNMT1-201ENST00000340748 MAP3K20Q9NYL2 800 aaKnown RBP13.7□□□□□ -0.22
DNMT1-201ENST00000340748 MSRAQ9UJ68 235 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 TTC26A0AVF1 554 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 SLC16A4O15374 487 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 PLS3P13797 630 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 CPB1P15086 417 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 STX1BP61266 288 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 EPHA7Q15375 998 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 CC2D1AQ6P1N0 951 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-201ENST00000340748 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 STAG2Q8N3U4 1231 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 RUBCNQ92622 972 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 OSBPL9Q96SU4 736 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 PPLO60437 1756 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 SLC16A3O15427 465 aaKnown RBP13.7□□□□□ -0.22
DNMT1-201ENST00000340748 TEX33O43247 280 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 EYA4O95677 639 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 NR3C2P08235 984 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 LAMC2Q13753 1193 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 TIPINQ9BVW5 301 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 PXDNQ92626 1479 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 PDS5AQ29RF7 1337 aaKnown RBP13.7□□□□□ -0.22
DNMT1-201ENST00000340748 ATRNO75882 1429 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 RBBP5Q15291 538 aaKnown RBP13.7□□□□□ -0.22
DNMT1-201ENST00000340748 ZKSCAN8Q15776 578 aaPredicted RBP13.7□□□□□ -0.22
DNMT1-201ENST00000340748 PDXDC1Q6P996 788 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 MOB2Q70IA6 237 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 LRGUKQ96M69 825 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 ASNSD1Q9NWL6 643 aa13.7□□□□□ -0.22
DNMT1-201ENST00000340748 PP2D1A8MPX8 630 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 BBS9Q3SYG4 887 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 HAUS8Q9BT25 410 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 XPNPEP3Q9NQH7 507 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 CPSF3Q9UKF6 684 aaKnown RBP13.69□□□□□ -0.22
DNMT1-201ENST00000340748 ZNF541Q9H0D2 1346 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 ZRANB2O95218 330 aaKnown RBP eCLIP13.69□□□□□ -0.22
DNMT1-201ENST00000340748 CYP2C9P11712 490 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 GPC3P51654 580 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 AP3M2P53677 418 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 TMEM62Q0P6H9 643 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 NR1H3Q13133 447 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 TFDP2Q14188 446 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 ATG16L1Q676U5 607 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 JADE1Q6IE81 842 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 SCN4BQ8IWT1 228 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 TTC39CQ8N584 583 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 CFAP36Q96G28 342 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 AGBL1Q96MI9 1066 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 LXNQ9BS40 222 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 NOC2LQ9Y3T9 749 aaKnown RBP13.69□□□□□ -0.22
DNMT1-201ENST00000340748 PDXKO00764 312 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 CDC42EP1Q00587 391 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 ZNF699Q32M78 642 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 KLC2Q9H0B6 622 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 ZWILCHQ9H900 591 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 SMYD2Q9NRG4 433 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 TBK1Q9UHD2 729 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 CA12O43570 354 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 SRGAP2O75044 1071 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 SERPINB6P35237 376 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 ARL4CP56559 192 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 TTC25Q96NG3 672 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.69□□□□□ -0.221e-7■■□□□ 14.2
DNMT1-201ENST00000340748 ITIH6Q6UXX5 1313 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 FOXN1O15353 648 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 DRAP1Q14919 205 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-201ENST00000340748 TRIM72Q6ZMU5 477 aa13.69□□□□□ -0.22
DNMT1-201ENST00000340748 TTC1Q99614 292 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms