RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 APOL6Q9BWW8 343 aa24.8■■□□□ 1.56
PBX1-201ENST00000340699 DAXXQ9UER7 740 aaPredicted RBP24.8■■□□□ 1.56
PBX1-201ENST00000340699 HES2Q9Y543 173 aa24.8■■□□□ 1.56
PBX1-201ENST00000340699 EYSQ5T1H1 3165 aa24.8■■□□□ 1.56
PBX1-201ENST00000340699 ZC3H11AO75152 810 aaKnown RBP eCLIP24.79■■□□□ 1.56
PBX1-201ENST00000340699 F13A1P00488 732 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 DNAJB1P25685 340 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 PBX3P40426 434 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 SMTNP53814 917 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 BCAR1P56945 870 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 MAPK7Q13164 816 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 CAMK1Q14012 370 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 GPBP1Q86WP2 473 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 MRPS27Q92552 414 aaKnown RBP24.79■■□□□ 1.56
PBX1-201ENST00000340699 RAD54LQ92698 747 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 SYMPKQ92797 1274 aaKnown RBP24.79■■□□□ 1.56
PBX1-201ENST00000340699 GBP3Q9H0R5 595 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 RNF39Q9H2S5 420 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 TMEM134Q9H6X4 195 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 TLR9Q9NR96 1032 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 TFIP11Q9UBB9 837 aaKnown RBP24.79■■□□□ 1.56
PBX1-201ENST00000340699 LZTS1Q9Y250 596 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 GIT1Q9Y2X7 761 aa24.79■■□□□ 1.56
PBX1-201ENST00000340699 NCK2O43639 380 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 KRT18P05783 430 aaKnown RBP24.78■■□□□ 1.56
PBX1-201ENST00000340699 PLS3P13797 630 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 DDIT3P35638 169 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 MCM6Q14566 821 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 TJAP1Q5JTD0 557 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 APBB1IPQ7Z5R6 666 aaPredicted RBP24.78■■□□□ 1.56
PBX1-201ENST00000340699 ASB2Q96Q27 587 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 NXF3Q9H4D5 531 aaKnown RBP24.78■■□□□ 1.56
PBX1-201ENST00000340699 PDZD7Q9H5P4 517 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 NRDE2Q9H7Z3 1164 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 BLOC1S4Q9NUP1 217 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 PARP2Q9UGN5 583 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 PLXNA4Q9HCM2 1894 aa24.78■■□□□ 1.56
PBX1-201ENST00000340699 MYH15Q9Y2K3 1946 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 SPTLC2O15270 562 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 POMCP01189 267 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 RRAGBQ5VZM2 374 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 PDE12Q6L8Q7 609 aaKnown RBP24.77■■□□□ 1.56
PBX1-201ENST00000340699 USP49Q70CQ1 688 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 SLC39A11Q8N1S5 342 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 LINC00301Q8NCQ3 95 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 SPIRE2Q8WWL2 714 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 LARP4BQ92615 738 aaKnown RBP24.77■■□□□ 1.56
PBX1-201ENST00000340699 GAD1Q99259 594 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 NTPCRQ9BSD7 190 aaKnown RBP24.77■■□□□ 1.56
PBX1-201ENST00000340699 LARSQ9P2J5 1176 aaKnown RBP24.77■■□□□ 1.56
PBX1-201ENST00000340699 ODF2LQ9ULJ1 636 aa24.77■■□□□ 1.56
PBX1-201ENST00000340699 NPHP3-ACAD11A0A0J9YXS1 232 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 ARL5CA6NH57 179 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 TTLL13PA6NNM8 815 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 NT5C1B-RDH14C9J2C7 533 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 SLC16A4O15374 487 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 AKAP5P24588 427 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 IRS1P35568 1242 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 MLH1P40692 756 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 CACNB1Q02641 598 aaPredicted RBP24.76■■□□□ 1.55
PBX1-201ENST00000340699 TFF2Q03403 129 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 FOXD4L6Q3SYB3 417 aaPredicted RBP24.76■■□□□ 1.55
PBX1-201ENST00000340699 ARSHQ5FYA8 562 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 ATF7IP2Q5U623 682 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 FOXD4L3Q6VB84 417 aaPredicted RBP24.76■■□□□ 1.55
PBX1-201ENST00000340699 EP400NLQ6ZTU2 488 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 TMEM169Q96HH4 297 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 UBE2ZQ9H832 354 aaPredicted RBP24.76■■□□□ 1.55
PBX1-201ENST00000340699 ARHGAP28Q9P2N2 729 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 STK17AQ9UEE5 414 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 USP20Q9Y2K6 914 aa24.76■■□□□ 1.55
PBX1-201ENST00000340699 MYH11P35749 1972 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 H0YCG3 227 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 PPP6R2O75170 966 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 YEATS4O95619 227 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 ALDH2P05091 517 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 GALTP07902 379 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 AFF1P51825 1210 aaKnown RBP24.75■■□□□ 1.55
PBX1-201ENST00000340699 STRN3Q13033 797 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 BECN1Q14457 450 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 BMS1Q14692 1282 aaKnown RBP24.75■■□□□ 1.55
PBX1-201ENST00000340699 DCAF4L1Q3SXM0 396 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 NT5DC1Q5TFE4 455 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 ZNF280BQ86YH2 543 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 LRRC15Q8TF66 581 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 TMEM175Q9BSA9 504 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 MRPL4Q9BYD3 311 aaKnown RBP24.75■■□□□ 1.55
PBX1-201ENST00000340699 IGFLR1Q9H665 355 aa24.75■■□□□ 1.55
PBX1-201ENST00000340699 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.74■■□□□ 1.55
PBX1-201ENST00000340699 INPPL1O15357 1258 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 DDHD2O94830 711 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 FAM13AO94988 1023 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 EDN1P05305 212 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 ERVFC1P60507 584 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 ATL3Q6DD88 541 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 CCDC73Q6ZRK6 1079 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 PABPC5Q96DU9 382 aaKnown RBP24.74■■□□□ 1.55
PBX1-201ENST00000340699 RPS6KC1Q96S38 1066 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 REEP2Q9BRK0 252 aa24.74■■□□□ 1.55
PBX1-201ENST00000340699 ENTPD7Q9NQZ7 604 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms