RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 A0A1W2PRU2 124 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 ENO4A6NNW6 628 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 INPPL1O15357 1258 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 RFPL2O75678 378 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.33
ATXN3-201ENST00000340660 METAP2P50579 478 aaKnown RBP eCLIP13.02□□□□□ -0.33
ATXN3-201ENST00000340660 PCSK4Q6UW60 755 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 CYP26C1Q6V0L0 522 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 SV2AQ7L0J3 742 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 LRRC43Q8N309 656 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 NSUN6Q8TEA1 469 aaKnown RBP13.02□□□□□ -0.33
ATXN3-201ENST00000340660 SMG7Q92540 1137 aaKnown RBP13.02□□□□□ -0.33
ATXN3-201ENST00000340660 TBC1D5Q92609 795 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 ATP6V0A4Q9HBG4 840 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 RGS18Q9NS28 235 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 PCDHB11Q9Y5F2 797 aa13.02□□□□□ -0.33
ATXN3-201ENST00000340660 SPAG17Q6Q759 2223 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 DOPEY2Q9Y3R5 2298 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 H0Y626 953 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 TRIM16O95361 564 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 MYBP10242 640 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 GPC1P35052 558 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 SLC24A5Q71RS6 500 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 WDR5BQ86VZ2 330 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 FAM181AQ8N9Y4 354 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 SYTL5Q8TDW5 730 aaPredicted RBP13.01□□□□□ -0.33
ATXN3-201ENST00000340660 ZBTB10Q96DT7 871 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 IWS1Q96ST2 819 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 ADAM2Q99965 735 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 LMAN1LQ9HAT1 526 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 TMEM9BQ9NQ34 198 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 CUEDC1Q9NWM3 386 aaPredicted RBP13.01□□□□□ -0.33
ATXN3-201ENST00000340660 C2orf42Q9NWW7 574 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 TMEM161AQ9NX61 479 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 CCDC171Q6TFL3 1326 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 F5P12259 2224 aa13.01□□□□□ -0.33
ATXN3-201ENST00000340660 MBLAC1A4D2B0 266 aaPredicted RBP13□□□□□ -0.33
ATXN3-201ENST00000340660 MEN1O00255 615 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 TRAK2O60296 914 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 PRDM1O75626 825 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 PAPSS2O95340 614 aaPredicted RBP13□□□□□ -0.33
ATXN3-201ENST00000340660 CNPP09543 421 aaKnown RBP13□□□□□ -0.33
ATXN3-201ENST00000340660 RHOQP17081 205 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 KLRC2P26717 231 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 TMEM62Q0P6H9 643 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 TMEM169Q96HH4 297 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 RMDN3Q96TC7 470 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 OSBPL3Q9H4L5 887 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 TUBE1Q9UJT0 475 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 TELO2Q9Y4R8 837 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 TRPV2Q9Y5S1 764 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 FBN3Q75N90 2809 aa13□□□□□ -0.33
ATXN3-201ENST00000340660 PLIN4Q96Q06 1357 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 COL6A6A6NMZ7 2263 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 ASCC3Q8N3C0 2202 aaKnown RBP12.99□□□□□ -0.33
ATXN3-201ENST00000340660 PCNX2A6NKB5 2137 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 EIF2AK2P19525 551 aaKnown RBP12.99□□□□□ -0.33
ATXN3-201ENST00000340660 POLGP54098 1239 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-201ENST00000340660 MARCH8Q5T0T0 291 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 CCNI2Q6ZMN8 369 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-201ENST00000340660 BCL7CQ8WUZ0 217 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-201ENST00000340660 GAB3Q8WWW8 586 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 KXD1Q9BQD3 176 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 VN1R3Q9BXE9 311 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 FAM49AQ9H0Q0 323 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-201ENST00000340660 MLXIPQ9HAP2 919 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 ARPP21Q9UBL0 812 aaPredicted RBP12.99□□□□□ -0.33
ATXN3-201ENST00000340660 HDAC5Q9UQL6 1122 aa12.99□□□□□ -0.33
ATXN3-201ENST00000340660 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 DENND3A2RUS2 1198 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 CAPN9O14815 690 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 PAPLNO95428 1278 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 BCAR1P56945 870 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 FAM189BP81408 668 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 UAP1L1Q3KQV9 507 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 IER5Q5VY09 327 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 BTNL9Q6UXG8 535 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 CYP2U1Q7Z449 544 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
ATXN3-201ENST00000340660 SPEM1Q8N4L4 309 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 PIP4K2CQ8TBX8 421 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 PRORYQ9H606 182 aa12.98□□□□□ -0.33
ATXN3-201ENST00000340660 ZFP37Q9Y6Q3 630 aaPredicted RBP12.98□□□□□ -0.33
ATXN3-201ENST00000340660 COL5A1P20908 1838 aaPredicted RBP12.97□□□□□ -0.33
ATXN3-201ENST00000340660 CAPN8A6NHC0 703 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 RPP40O75818 363 aaKnown RBP12.97□□□□□ -0.33
ATXN3-201ENST00000340660 FAM193AP78312 1265 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 CCDC96Q2M329 555 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 MTSS1LQ765P7 747 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 WDR63Q8IWG1 891 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 ZNF444Q8N0Y2 327 aaPredicted RBP12.97□□□□□ -0.33
ATXN3-201ENST00000340660 ADAMTS10Q9H324 1103 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 SLC32A1Q9H598 525 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 ELAC1Q9H777 363 aaKnown RBP12.97□□□□□ -0.33
ATXN3-201ENST00000340660 MTMR7Q9Y216 660 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 SLC4A4Q9Y6R1 1079 aa12.97□□□□□ -0.33
ATXN3-201ENST00000340660 MGAQ8IWI9 3026 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms