RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TOPORSQ9NS56 1045 aaPredicted RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 MTUS1Q9ULD2 1270 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 EIF4E1BA6NMX2 242 aaKnown RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 BYSLQ13895 437 aaKnown RBP15.48■□□□□ 0.07
CPSF7-201ENST00000340437 FAM102BQ5T8I3 360 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 TAOK3Q9H2K8 898 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 ODF2LQ9ULJ1 636 aa15.48■□□□□ 0.07
CPSF7-201ENST00000340437 PHF2O75151 1096 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 MYCLP12524 364 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 EIF3BP55884 814 aaKnown RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 SOX10P56693 466 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 POU5F1Q01860 360 aaKnown RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 ZDHHC24Q6UX98 284 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 ZNF564Q8TBZ8 553 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 N4BP2L2Q92802 583 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 BORCS6Q96GS4 357 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 TACO1Q9BSH4 297 aaKnown RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 FAM129AQ9BZQ8 928 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 TRPC6Q9Y210 931 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 RREB1Q92766 1687 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 VCAM1P19320 739 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 CEP55Q53EZ4 464 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 ERMARDQ5T6L9 678 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 NUGGCQ68CJ6 796 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 HHIPL2Q6UWX4 724 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 TAB3Q8N5C8 712 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 CCDC63Q8NA47 563 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 CERKQ8TCT0 537 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 CRAMP1Q96RY5 1269 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 TRIM7Q9C029 511 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 CXorf56Q9H5V9 222 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 ACTR5Q9H9F9 607 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 ZDHHC18Q9NUE0 388 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 FGFR1OP2Q9NVK5 253 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 INTUQ9ULD6 942 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 CCT8L1PA6NM43 557 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 TCP11X1B4DZS4 312 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 RARAP10276 462 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 MXI1P50539 228 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 NPEPPSP55786 919 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 KYNUQ16719 465 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 GRIPAP1Q4V328 841 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 RNF207Q6ZRF8 634 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 NOP9Q86U38 636 aaKnown RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 MBOAT7Q96N66 472 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 ZSWIM1Q9BR11 485 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 TEKT3Q9BXF9 490 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 CNOT10Q9H9A5 744 aaKnown RBP15.47■□□□□ 0.07
CPSF7-201ENST00000340437 ABCF3Q9NUQ8 709 aa15.47■□□□□ 0.07
CPSF7-201ENST00000340437 SGO2Q562F6 1265 aa15.46■□□□□ 0.07
CPSF7-201ENST00000340437 YTHDF3Q7Z739 585 aaKnown RBP15.46■□□□□ 0.07
CPSF7-201ENST00000340437 RHOT2Q8IXI1 618 aa15.46■□□□□ 0.07
CPSF7-201ENST00000340437 PRMT6Q96LA8 375 aaPredicted RBP15.46■□□□□ 0.07
CPSF7-201ENST00000340437 IGLV3-22A0A075B6J6 115 aa15.46■□□□□ 0.07
CPSF7-201ENST00000340437 GBP2P32456 591 aaPredicted RBP15.46■□□□□ 0.07
CPSF7-201ENST00000340437 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.07
CPSF7-201ENST00000340437 CBWD2Q8IUF1 395 aa15.46■□□□□ 0.07
CPSF7-201ENST00000340437 WDR11Q9BZH6 1224 aa15.46■□□□□ 0.07
CPSF7-201ENST00000340437 LARSQ9P2J5 1176 aaKnown RBP15.46■□□□□ 0.07
CPSF7-201ENST00000340437 RPTORQ8N122 1335 aa15.46■□□□□ 0.06
CPSF7-201ENST00000340437 PSMD10O75832 226 aa15.46■□□□□ 0.06
CPSF7-201ENST00000340437 CYP4F22Q6NT55 531 aa15.46■□□□□ 0.06
CPSF7-201ENST00000340437 ARHGEF2Q92974 986 aaKnown RBP15.46■□□□□ 0.06
CPSF7-201ENST00000340437 EPB41L4BQ9H329 900 aa15.46■□□□□ 0.06
CPSF7-201ENST00000340437 L3MBTL1Q9Y468 752 aa15.46■□□□□ 0.06
CPSF7-201ENST00000340437 GTPBP10A4D1E9 387 aaKnown RBP15.45■□□□□ 0.06
CPSF7-201ENST00000340437 FAM187AA6NFU0 413 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 RASSF9O75901 435 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 CHRNA3P32297 505 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 ADCY8P40145 1251 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 AOC3Q16853 763 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 PLA2G4FQ68DD2 849 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 MOXD1Q6UVY6 613 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 AEBP2Q6ZN18 517 aaPredicted RBP15.45■□□□□ 0.06
CPSF7-201ENST00000340437 FAM47EQ6ZV65 393 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 SGSM3Q96HU1 749 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 AGBL1Q96MI9 1066 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 GRHL1Q9NZI5 618 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 HSPBP1Q9NZL4 362 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 STRCQ7RTU9 1775 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 SYNGAP1Q96PV0 1343 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 EIF3DO15371 548 aaKnown RBP eCLIP15.45■□□□□ 0.06
CPSF7-201ENST00000340437 RAD17O75943 681 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 ECEL1O95672 775 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 EZRP15311 586 aaKnown RBP15.45■□□□□ 0.06
CPSF7-201ENST00000340437 COILP38432 576 aaPredicted RBP15.45■□□□□ 0.06
CPSF7-201ENST00000340437 KRT17Q04695 432 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 DHX34Q14147 1143 aaKnown RBP15.45■□□□□ 0.06
CPSF7-201ENST00000340437 C6orf118Q5T5N4 469 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 PASD1Q8IV76 773 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 CRYGNQ8WXF5 182 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 KLHL11Q9NVR0 708 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 ECE2O60344 883 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 SWT1Q5T5J6 900 aaKnown RBP15.45■□□□□ 0.06
CPSF7-201ENST00000340437 CPA5Q8WXQ8 436 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 MKL1Q969V6 931 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 TUFT1Q9NNX1 390 aa15.45■□□□□ 0.06
CPSF7-201ENST00000340437 ANAPC7Q9UJX3 599 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms