RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 UNC13DQ70J99 1090 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 MCM10Q7L590 875 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 PBXIP1Q96AQ6 731 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 SCAF8Q9UPN6 1271 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 CARMIL3Q8ND23 1372 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 MTSS1O43312 755 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 RTN2O75298 545 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 GPC4O75487 556 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 TNFRSF8P28908 595 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 OXCT1P55809 520 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 BNIP1Q12981 228 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 SDE2Q6IQ49 451 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 NEK5Q6P3R8 708 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 CCT6BQ92526 530 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 NSMCE3Q96MG7 304 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 OSBPL6Q9BZF3 934 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 NPHS2Q9NP85 383 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 IARS2Q9NSE4 1012 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 RBMX2Q9Y388 322 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 RNF113AO15541 343 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 CALUO43852 315 aaPredicted RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 WDR47O94967 919 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 LYNP07948 512 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 GRK2P25098 689 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 GNAQP50148 359 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 PRAMEP78395 509 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 TRIM25Q14258 630 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 TAF12Q16514 161 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 KLHL12Q53G59 568 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 C1orf131Q8NDD1 294 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 DCUN1D5Q9BTE7 237 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 CNNM1Q9NRU3 951 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 DNAJC12Q9UKB3 198 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 AGTPBP1Q9UPW5 1226 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 MIF4GDA9UHW6 222 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 TEX33O43247 280 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 SRGAP2BP0DMP2 458 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 ARHGEF6Q15052 776 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 RESP18Q5W5W9 173 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 EIF1ADQ8N9N8 165 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 FAM227BQ96M60 508 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 SERPINB12Q96P63 405 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 GPATCH1Q9BRR8 931 aaKnown RBP13.38□□□□□ -0.27
BRPF3-201ENST00000339717 CCDC90BQ9GZT6 254 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 FAM135AQ9P2D6 1515 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 MROH7Q68CQ1 1323 aa13.38□□□□□ -0.27
BRPF3-201ENST00000339717 A0A087WXM4 84 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 H3BRJ5 948 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 ZC3H11AO75152 810 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRPF3-201ENST00000339717 ASLP04424 464 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 PRKACBP22694 351 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 RPS6KA2Q15349 733 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 SCFD1Q8WVM8 642 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.37□□□□□ -0.27
BRPF3-201ENST00000339717 GPATCH8Q9UKJ3 1502 aaKnown RBP13.37□□□□□ -0.27
BRPF3-201ENST00000339717 EPN2O95208 641 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 LINGO3P0C6S8 592 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 YWHAGP61981 247 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRPF3-201ENST00000339717 EGFLAMQ63HQ2 1017 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 SH3TC2Q8TF17 1288 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 PYROXD1Q8WU10 500 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 TTC17Q96AE7 1141 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 STK33Q9BYT3 514 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 CEP44Q9C0F1 390 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 CYP4F11Q9HBI6 524 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 CCDC59Q9P031 241 aaKnown RBP13.37□□□□□ -0.27
BRPF3-201ENST00000339717 NCK2O43639 380 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 SLC1A1P43005 524 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 NCALDP61601 193 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 JADE1Q6IE81 842 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 RINT1Q6NUQ1 792 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 ALKBH8Q96BT7 664 aaKnown RBP13.37□□□□□ -0.27
BRPF3-201ENST00000339717 ECSITQ9BQ95 431 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 MYRFQ9Y2G1 1151 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 ABCB4P21439 1286 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 DRD4P21917 467 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
BRPF3-201ENST00000339717 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 RMND5BQ96G75 393 aaPredicted RBP13.37□□□□□ -0.27
BRPF3-201ENST00000339717 MAGED4Q96JG8 741 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 TSSK1BQ9BXA7 367 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 BAG5Q9UL15 447 aa13.37□□□□□ -0.27
BRPF3-201ENST00000339717 ABCC12Q96J65 1359 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 ARHGEF37A1IGU5 675 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 NFIBO00712 420 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 GNGT2O14610 69 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 RAD51CO43502 376 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 FAM228BP0C875 321 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 ITGAXP20702 1163 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 CCT3P49368 545 aaKnown RBP13.36□□□□□ -0.27
BRPF3-201ENST00000339717 PPARAQ07869 468 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 PDK3Q15120 406 aa13.36□□□□□ -0.27
BRPF3-201ENST00000339717 PABPC3Q9H361 631 aaKnown RBP13.36□□□□□ -0.27
BRPF3-201ENST00000339717 TRIM45Q9H8W5 580 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms