RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TNFAIP3P21580 790 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 MRPS9P82933 396 aaKnown RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 CTNNBL1Q8WYA6 563 aaPredicted RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 RMDN3Q96TC7 470 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 TXNRD2Q9NNW7 524 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 A1CFQ9NQ94 594 aaKnown RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 LARSQ9P2J5 1176 aaKnown RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 SUCLA2Q9P2R7 463 aaPredicted RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 INTUQ9ULD6 942 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 TRPM7Q96QT4 1865 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 ZNF233A6NK53 670 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 SART1O43290 800 aaKnown RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 GCLMP48507 274 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 RARRES1P49788 294 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 NAA35Q5VZE5 725 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 SYCE1Q8N0S2 351 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 SLC20A1Q8WUM9 679 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 PIK3R5Q8WYR1 880 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 THAP2Q9H0W7 228 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 AGO4Q9HCK5 861 aaKnown RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 UBE2TQ9NPD8 197 aaPredicted RBP17.65■□□□□ 0.42
LITAF-201ENST00000339430 GPRC5CQ9NQ84 441 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 RBPJLQ9UBG7 517 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 AMACRQ9UHK6 382 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 AMFRQ9UKV5 643 aa17.65■□□□□ 0.42
LITAF-201ENST00000339430 CNMDO75829 334 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 MYCLP12524 364 aaPredicted RBP17.64■□□□□ 0.41
LITAF-201ENST00000339430 PPP3CAQ08209 521 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 UGCGQ16739 394 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 RIOX2Q8IUF8 465 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 ARHGEF19Q8IW93 802 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 IQCKQ8N0W5 287 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 LMO3Q8TAP4 145 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 NEK9Q8TD19 979 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 SYT11Q9BT88 431 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 CAPS2Q9BXY5 557 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 CYP39A1Q9NYL5 469 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 RRP15Q9Y3B9 282 aaKnown RBP17.64■□□□□ 0.41
LITAF-201ENST00000339430 BTBD19C9JJ37 291 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 TULP2O00295 520 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 PDHXO00330 501 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 SHOX2O60902 331 aaPredicted RBP17.64■□□□□ 0.41
LITAF-201ENST00000339430 IRAK1P51617 712 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 IRX5P78411 483 aaPredicted RBP17.64■□□□□ 0.41
LITAF-201ENST00000339430 PRPF4BQ13523 1007 aaKnown RBP17.64■□□□□ 0.41
LITAF-201ENST00000339430 MTMR1Q13613 665 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 ADAT2Q7Z6V5 191 aaKnown RBP17.64■□□□□ 0.41
LITAF-201ENST00000339430 SRLQ86TD4 932 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 NCAPG2Q86XI2 1143 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 SLC9A9Q8IVB4 645 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 CHST13Q8NET6 341 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 RFFLQ8WZ73 363 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 HES6Q96HZ4 224 aa17.64■□□□□ 0.41
LITAF-201ENST00000339430 ANKRD65E5RJM6 399 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 TMEM253P0C7T8 217 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 QARSP47897 775 aaKnown RBP17.63■□□□□ 0.41
LITAF-201ENST00000339430 ATP1A2P50993 1020 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 VAMP7P51809 220 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 GNGT1P63211 74 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 ARHGEF16Q5VV41 709 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 WHAMMQ8TF30 809 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 MOV10L1Q9BXT6 1211 aaKnown RBP17.63■□□□□ 0.41
LITAF-201ENST00000339430 CELF4Q9BZC1 486 aaKnown RBP17.63■□□□□ 0.41
LITAF-201ENST00000339430 ISCUQ9H1K1 167 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 NEUROG2Q9H2A3 272 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 PXMP2Q9NR77 195 aa17.63■□□□□ 0.41
LITAF-201ENST00000339430 GOLGA8IPA6NC78 632 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 GOLGA8JA6NMD2 632 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 TRIM66O15016 1216 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 BCRP11274 1271 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 ECHS1P30084 290 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 YWHABP31946 246 aaKnown RBP17.62■□□□□ 0.41
LITAF-201ENST00000339430 USP8P40818 1118 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 ZNF157P51786 506 aaPredicted RBP17.62■□□□□ 0.41
LITAF-201ENST00000339430 NPEPPSP55786 919 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 PEX3P56589 373 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 PGM5Q15124 567 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 Q3C1V9 767 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 ANKRD35Q8N283 1001 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 R3HDMLQ9H3Y0 253 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 PNMA3Q9UL41 463 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 NCANO14594 1321 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 ATP8B3O60423 1300 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 PASKQ96RG2 1323 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 BACH1O14867 736 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 SLC16A4O15374 487 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 FGGP02679 453 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 PCNX4Q63HM2 1172 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 PLA2G4FQ68DD2 849 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 MAATS1Q7Z4T9 603 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 SAPCD2Q86UD0 394 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 RASGEF1CQ8N431 466 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 PLEKHO2Q8TD55 490 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 KAT5Q92993 513 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 CALR3Q96L12 384 aaKnown RBP17.62■□□□□ 0.41
LITAF-201ENST00000339430 ACCSQ96QU6 501 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 PDCD2LQ9BRP1 358 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 TMEM206Q9H813 350 aa17.62■□□□□ 0.41
LITAF-201ENST00000339430 HSPBP1Q9NZL4 362 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms