RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 GAS2O43903 313 aaKnown RBP17.45■□□□□ 0.38
LINC01116-202ENST00000339037 CDKL5O76039 1030 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 POMCP01189 267 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 ALDH2P05091 517 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 CNPP09543 421 aaKnown RBP17.45■□□□□ 0.38
LINC01116-202ENST00000339037 HOXA11P31270 313 aaPredicted RBP17.45■□□□□ 0.38
LINC01116-202ENST00000339037 YWHABP31946 246 aaKnown RBP17.45■□□□□ 0.38
LINC01116-202ENST00000339037 NBR1Q14596 966 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 ASTLQ6HA08 431 aaPredicted RBP17.45■□□□□ 0.38
LINC01116-202ENST00000339037 FEZF2Q8TBJ5 459 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 KLHL5Q96PQ7 755 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 TMEM175Q9BSA9 504 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 FAN1Q9Y2M0 1017 aa17.45■□□□□ 0.38
LINC01116-202ENST00000339037 MARCH6O60337 910 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 CCNT1O60563 726 aaKnown RBP17.44■□□□□ 0.38
LINC01116-202ENST00000339037 ERLIN2O94905 339 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 URODP06132 367 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 EMC2Q15006 297 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 UBXN11Q5T124 520 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 C15orf39Q6ZRI6 1047 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 OTUD6AQ7L8S5 288 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 C4orf19Q8IY42 314 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 RNF149Q8NC42 400 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 TCP11Q8WWU5 503 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 PHF20Q9BVI0 1012 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 TM6SF1Q9BZW5 370 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 UBN1Q9NPG3 1134 aa17.44■□□□□ 0.38
LINC01116-202ENST00000339037 PRG3Q9Y2Y8 225 aaPredicted RBP17.44■□□□□ 0.38
LINC01116-202ENST00000339037 DCHS1Q96JQ0 3298 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 PROB1E7EW31 1015 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 C2CD2LO14523 706 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 NRP1O14786 923 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 TBX3O15119 743 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 LILRB3O75022 631 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 SOD2P04179 222 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 XBP1P17861 261 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 NCLP19338 710 aaKnown RBP17.43■□□□□ 0.38
LINC01116-202ENST00000339037 CLCN5P51795 746 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 EPHA7Q15375 998 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 NCAPH2Q6IBW4 605 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 FERMT3Q86UX7 667 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 CNNM3Q8NE01 707 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 HAS1Q92839 578 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 NAP1L4Q99733 375 aaKnown RBP17.43■□□□□ 0.38
LINC01116-202ENST00000339037 ZSWIM4Q9H7M6 989 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 RGL1Q9NZL6 768 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 ZNF292O60281 2723 aa17.43■□□□□ 0.38
LINC01116-202ENST00000339037 DENND4AQ7Z401 1863 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 ASAP2O43150 1006 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 ADH1AP07327 375 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 ITGA4P13612 1032 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 PRKCSHP14314 528 aaPredicted RBP17.42■□□□□ 0.38
LINC01116-202ENST00000339037 AK2P54819 239 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 TDGQ13569 410 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 PCBP1Q15365 356 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC01116-202ENST00000339037 XKR9Q5GH70 373 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 NOTUMQ6P988 496 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 ELMSAN1Q6PJG2 1045 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 PIK3AP1Q6ZUJ8 805 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 SMG8Q8ND04 991 aaKnown RBP17.42■□□□□ 0.38
LINC01116-202ENST00000339037 FLCNQ8NFG4 579 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 RPS6KC1Q96S38 1066 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 MTRQ99707 1265 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 MAN1C1Q9NR34 630 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 PDRG1Q9NUG6 133 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 DMXL1Q9Y485 3027 aa17.42■□□□□ 0.38
LINC01116-202ENST00000339037 ARL5CA6NH57 179 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 TSPAN1O60635 241 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 MLH1P40692 756 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 NBL1P41271 181 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 OR1G1P47890 313 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 CYP4A11Q02928 519 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 NCBP1Q09161 790 aaKnown RBP17.41■□□□□ 0.38
LINC01116-202ENST00000339037 SCRN1Q12765 414 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 MXD4Q14582 209 aaPredicted RBP17.41■□□□□ 0.38
LINC01116-202ENST00000339037 SLFN12Q8IYM2 578 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 CMASQ8NFW8 434 aaPredicted RBP17.41■□□□□ 0.38
LINC01116-202ENST00000339037 OXER1Q8TDS5 423 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 CCDC51Q96ER9 411 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 DYDC2Q96IM9 177 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 SNX27Q96L92 541 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 HERC2P3Q9BVR0 1158 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 KCNK12Q9HB15 430 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 GJB4Q9NTQ9 266 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 MARCH5Q9NX47 278 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 DPP7Q9UHL4 492 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 DUSP12Q9UNI6 340 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 SSX2IPQ9Y2D8 614 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 IPPQ9Y573 584 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 STK36Q9NRP7 1315 aa17.41■□□□□ 0.38
LINC01116-202ENST00000339037 ARID2Q68CP9 1835 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 INO80B-WBP1J3KQ70 363 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 ZBTB39O15060 712 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 INPPL1O15357 1258 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 TEX28O15482 410 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 GLUD1P00367 558 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 AXLP30530 894 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 GLUD2P49448 558 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 PTENP60484 403 aa17.4■□□□□ 0.38
LINC01116-202ENST00000339037 SPIRE1Q08AE8 756 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms