RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 FKBP3Q00688 224 aaKnown RBP23.55■■□□□ 1.36
TPM1-204ENST00000334895 FAAP100Q0VG06 881 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 PRPF4BQ13523 1007 aaKnown RBP23.55■■□□□ 1.36
TPM1-204ENST00000334895 ZSWIM2Q8NEG5 633 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 TMEM174Q8WUU8 243 aa23.55■■□□□ 1.36
TPM1-204ENST00000334895 CGNQ9P2M7 1197 aaKnown RBP23.55■■□□□ 1.36
TPM1-204ENST00000334895 NOC2LQ9Y3T9 749 aaKnown RBP23.55■■□□□ 1.36
TPM1-204ENST00000334895 PDE4DIPQ5VU43 2346 aa23.54■■□□□ 1.36
TPM1-204ENST00000334895 GOLGA6L19H0YKK7 550 aa23.54■■□□□ 1.36
TPM1-204ENST00000334895 ATP1A3P13637 1013 aa23.54■■□□□ 1.36
TPM1-204ENST00000334895 ARF4P18085 180 aaPredicted RBP23.54■■□□□ 1.36
TPM1-204ENST00000334895 ADAM9Q13443 819 aa23.54■■□□□ 1.36
TPM1-204ENST00000334895 TPD52L1Q16890 204 aaPredicted RBP23.54■■□□□ 1.36
TPM1-204ENST00000334895 TSHZ1Q6ZSZ6 1077 aa23.54■■□□□ 1.36
TPM1-204ENST00000334895 FAM228AQ86W67 206 aa23.54■■□□□ 1.36
TPM1-204ENST00000334895 SLC9A9Q8IVB4 645 aa23.54■■□□□ 1.36
TPM1-204ENST00000334895 PTPRHQ9HD43 1115 aa23.54■■□□□ 1.36
TPM1-204ENST00000334895 PROZP22891 400 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 ATF7IP2Q5U623 682 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 EEF1DP3Q658K8 133 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 ARMCX5Q6P1M9 558 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 CAGE1Q8TC20 777 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 CPB2Q96IY4 423 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 PCIF1Q9H4Z3 704 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 THAP9Q9H5L6 903 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 ATP11BQ9Y2G3 1177 aa23.53■■□□□ 1.36
TPM1-204ENST00000334895 TLR3O15455 904 aaKnown RBP23.52■■□□□ 1.36
TPM1-204ENST00000334895 HOXA11P31270 313 aaPredicted RBP23.52■■□□□ 1.36
TPM1-204ENST00000334895 CASP4P49662 377 aa23.52■■□□□ 1.36
TPM1-204ENST00000334895 CYP2J2P51589 502 aa23.52■■□□□ 1.36
TPM1-204ENST00000334895 MBTPS1Q14703 1052 aa23.52■■□□□ 1.36
TPM1-204ENST00000334895 FBXO47Q5MNV8 452 aa23.52■■□□□ 1.36
TPM1-204ENST00000334895 CATSPER4Q7RTX7 472 aa23.52■■□□□ 1.36
TPM1-204ENST00000334895 CDR2LQ86X02 465 aaPredicted RBP23.52■■□□□ 1.36
TPM1-204ENST00000334895 CEP63Q96MT8 703 aa23.52■■□□□ 1.36
TPM1-204ENST00000334895 AGO3Q9H9G7 860 aaKnown RBP23.52■■□□□ 1.36
TPM1-204ENST00000334895 HSPBP1Q9NZL4 362 aa23.52■■□□□ 1.36
TPM1-204ENST00000334895 TNFSF13BQ9Y275 285 aa23.52■■□□□ 1.36
TPM1-204ENST00000334895 DCDC2CA8MYV0 355 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 TOM1L1O75674 476 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 AKAP3O75969 853 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 ERLIN2O94905 339 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 GARTP22102 1010 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 SFPQP23246 707 aaKnown RBP eCLIP23.51■■□□□ 1.35
TPM1-204ENST00000334895 MYBPC2Q14324 1141 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 PCBP1Q15365 356 aaKnown RBP eCLIP23.51■■□□□ 1.35
TPM1-204ENST00000334895 NOC3LQ8WTT2 800 aaKnown RBP23.51■■□□□ 1.35
TPM1-204ENST00000334895 NOC4LQ9BVI4 516 aaKnown RBP23.51■■□□□ 1.35
TPM1-204ENST00000334895 PDZD7Q9H5P4 517 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 GRPEL1Q9HAV7 217 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 ANKFY1Q9P2R3 1169 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 UMODL1Q5DID0 1318 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 A0A0B4J269 797 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 CETN3O15182 167 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 RPL13P26373 211 aaKnown RBP23.51■■□□□ 1.35
TPM1-204ENST00000334895 LPIN1Q14693 890 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 POMGNT1Q8WZA1 660 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 AGPAT5Q9NUQ2 364 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 TBX21Q9UL17 535 aa23.51■■□□□ 1.35
TPM1-204ENST00000334895 TANC1Q9C0D5 1861 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 A0A1B0GUA9 196 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 AP5Z1O43299 807 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 RPS6KA5O75582 802 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 GHRP10912 638 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 BFSP2Q13515 415 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 UVSSAQ2YD98 709 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 MPZL3Q6UWV2 235 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 LRRC8DQ7L1W4 858 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 FILIP1Q7Z7B0 1213 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 CCDC155Q8N6L0 562 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 SAAL1Q96ER3 474 aa23.5■■□□□ 1.35
TPM1-204ENST00000334895 CNOT6LQ96LI5 555 aaKnown RBP23.5■■□□□ 1.35
TPM1-204ENST00000334895 PITPNM1O00562 1244 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 FAM189A1O60320 539 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 SELPP16109 830 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 MCL1Q07820 350 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 CEP135Q66GS9 1140 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 SLFN12LQ6IEE8 588 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 ZBTB33Q86T24 672 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 XXYLT1Q8NBI6 393 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 HTATIP2Q9BUP3 242 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 ST3GAL5Q9UNP4 418 aa23.49■■□□□ 1.35
TPM1-204ENST00000334895 GOLGA8IPA6NC78 632 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 GOLGA8JA6NMD2 632 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 KCNJ18B7U540 433 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 CLDN3O15551 220 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 EXOC3O60645 756 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 FGFR1OPO95684 399 aaKnown RBP23.48■■□□□ 1.35
TPM1-204ENST00000334895 CD52P31358 61 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 TPM4P67936 248 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 MLLT1Q03111 559 aaPredicted RBP23.48■■□□□ 1.35
TPM1-204ENST00000334895 KCNJ12Q14500 433 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 GPNMBQ14956 572 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 ZNF568Q3ZCX4 644 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 TCP11X2Q5H9J9 407 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 ZBTB41Q5SVQ8 909 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 APTXQ7Z2E3 356 aaKnown RBP23.48■■□□□ 1.35
TPM1-204ENST00000334895 FBXL18Q96ME1 805 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 MSTO1Q9BUK6 570 aa23.48■■□□□ 1.35
TPM1-204ENST00000334895 CDT1Q9H211 546 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms