RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 WNT8AQ9H1J5 351 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 EXOSC4Q9NPD3 245 aaKnown RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 C20orf96Q9NUD7 363 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 FAM95CA0A1B0GW59 222 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 TTC26A0AVF1 554 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 MYO1GB0I1T2 1018 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 KCNA2P16389 499 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 ASPRV1Q53RT3 343 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 CCNI2Q6ZMN8 369 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 NCAPG2Q86XI2 1143 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 AMNQ9BXJ7 453 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 SYBUQ9NX95 663 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 UBAP1Q9NZ09 502 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 MARCOQ9UEW3 520 aaPredicted RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 SRP72O76094 671 aaKnown RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 GCP02774 474 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 ROR1Q01973 937 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 UBE2SQ16763 222 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 LRRC31Q6UY01 552 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 SFR1Q86XK3 245 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 CLMNQ96JQ2 1002 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 RNPC3Q96LT9 517 aaKnown RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 TRIM51Q9BSJ1 452 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 SARS2Q9NP81 518 aaKnown RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 UBE4BO95155 1302 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 ARPP19P56211 112 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 TFDP2Q14188 446 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 GANCQ8TET4 914 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 TMEM245Q9H330 911 aa10.38□□□□□ -0.75
COL4A6-201ENST00000334504 SMG5Q9UPR3 1016 aaKnown RBP10.38□□□□□ -0.75
COL4A6-201ENST00000334504 AIM2O14862 343 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ASAP2O43150 1006 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 TMCC1O94876 653 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 GGPS1O95749 300 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 SOX11P35716 441 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 SLC16A2P36021 539 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 CTTNQ14247 550 aaKnown RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 POTEAQ6S8J7 498 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ASNSD1Q9NWL6 643 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ZCCHC18P0CG32 403 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 UNC13DQ70J99 1090 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 GPR141Q7Z602 305 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 FMR1NBQ8N0W7 255 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 MRPL1Q9BYD6 325 aaKnown RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ARSEP51690 589 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 TTC33Q6PID6 262 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 CCDC81Q6ZN84 652 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 RHPN2Q8IUC4 686 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 SLC7A3Q8WY07 619 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 WDR11Q9BZH6 1224 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ATP6V0A4Q9HBG4 840 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 IL1RAPL1Q9NZN1 696 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF212Q9UDV6 495 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 SNX12Q9UMY4 172 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 KPNB1Q14974 876 aaKnown RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 FAM83BQ5T0W9 1011 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 TBC1D9BQ66K14 1250 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 C4orf33Q8N1A6 199 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 NMD3Q96D46 503 aaKnown RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 CMTM5Q96DZ9 223 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ZIM3Q96PE6 472 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 IRX2Q9BZI1 471 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 SENP1Q9P0U3 644 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ZFATQ9P243 1243 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 SKAP2O75563 359 aaPredicted RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 IFNAR1P17181 557 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF394Q53GI3 561 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 PRPF39Q86UA1 669 aaKnown RBP10.37□□□□□ -0.75
COL4A6-201ENST00000334504 PHF21AQ96BD5 680 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 C11orf70Q9BRQ4 267 aa10.37□□□□□ -0.75
COL4A6-201ENST00000334504 HSPA1AP0DMV8 641 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 HSPA1BP0DMV9 641 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 PHKA1P46020 1223 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 CPA2P48052 419 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 CCZ1BP86790 482 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 CCZ1P86791 482 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 RCN1Q15293 331 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 URB2Q14146 1524 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 FTLP02792 175 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 CDH2P19022 906 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 TARSP26639 723 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 KCNH2Q12809 1159 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 STX3Q13277 289 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 MXD4Q14582 209 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 ANGPT1Q15389 498 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 KYNUQ16719 465 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 ARL6IP4Q66PJ3 421 aaKnown RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 ZNF746Q6NUN9 644 aaPredicted RBP10.36□□□□□ -0.75
COL4A6-201ENST00000334504 IFT43Q96FT9 208 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 AGBL1Q96MI9 1066 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 NDEL1Q9GZM8 345 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 AS3MTQ9HBK9 375 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 SCN3BQ9NY72 215 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 RASSF9O75901 435 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 FAM107AO95990 144 aa10.36□□□□□ -0.75
COL4A6-201ENST00000334504 DLGAP5Q15398 846 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms