RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 C2orf40Q9H1Z8 148 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 METTL14Q9HCE5 456 aaKnown RBP12.72□□□□□ -0.37
HDAC6-201ENST00000334136 NAV1Q8NEY1 1877 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 TUBGCP6Q96RT7 1819 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 TNFAIP3P21580 790 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 EIF4A3P38919 411 aaKnown RBP12.72□□□□□ -0.37
HDAC6-201ENST00000334136 VEGFBP49765 207 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 SETDB1Q15047 1291 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 TC2NQ8N9U0 490 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 CHP1Q99653 195 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 KIF3CO14782 793 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 CCNE1P24864 410 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 SLC26A2P50443 739 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 SLC35G1Q2M3R5 365 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 VWA3BQ502W6 1294 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 RAD9BQ6WBX8 426 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 MMS22LQ6ZRQ5 1243 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 LRRC71Q8N4P6 559 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 NKIRAS1Q9NYS0 192 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 COL20A1Q9P218 1284 aa12.72□□□□□ -0.37
HDAC6-201ENST00000334136 TTC26A0AVF1 554 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 RGS16O15492 202 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-201ENST00000334136 KPNA6O60684 536 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 GJA5P36382 358 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 RFC5P40937 340 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 OSTNP61366 133 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 EMC2Q15006 297 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 EFCAB12Q6NXP0 572 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 DPH6Q7L8W6 267 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 U2AF1L4Q8WU68 220 aaKnown RBP12.71□□□□□ -0.37
HDAC6-201ENST00000334136 MAF1Q9H063 256 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 PRDM5Q9NQX1 630 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-201ENST00000334136 CTTNBP2NLQ9P2B4 639 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 TRIM10Q9UDY6 481 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 MTUS1Q9ULD2 1270 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 LRFN2Q9ULH4 789 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 MYO5AQ9Y4I1 1855 aaKnown RBP12.71□□□□□ -0.37
HDAC6-201ENST00000334136 NPHP3-ACAD11A0A0J9YXS1 232 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 EEF1GP26641 437 aaKnown RBP12.71□□□□□ -0.37
HDAC6-201ENST00000334136 GRK4P32298 578 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.37
HDAC6-201ENST00000334136 MXRA7P84157 204 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 GJC2Q5T442 439 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-201ENST00000334136 HAUS6Q7Z4H7 955 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 FAM193BQ96PV7 902 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-201ENST00000334136 TIPINQ9BVW5 301 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 EP400Q96L91 3159 aa12.71□□□□□ -0.37
HDAC6-201ENST00000334136 CTSHP09668 335 aa12.71□□□□□ -0.38
HDAC6-201ENST00000334136 TMEM191BP0C7N4 346 aa12.71□□□□□ -0.38
HDAC6-201ENST00000334136 NOVP48745 357 aa12.71□□□□□ -0.38
HDAC6-201ENST00000334136 MXD4Q14582 209 aaPredicted RBP12.71□□□□□ -0.38
HDAC6-201ENST00000334136 ARHGAP44Q17R89 818 aa12.71□□□□□ -0.38
HDAC6-201ENST00000334136 CCDC105Q8IYK2 499 aa12.71□□□□□ -0.38
HDAC6-201ENST00000334136 NOA1Q8NC60 698 aaKnown RBP12.71□□□□□ -0.38
HDAC6-201ENST00000334136 ASIC3Q9UHC3 531 aa12.71□□□□□ -0.38
HDAC6-201ENST00000334136 RWDD2AQ9UIY3 292 aa12.71□□□□□ -0.38
HDAC6-201ENST00000334136 IKBKGQ9Y6K9 419 aa12.71□□□□□ -0.38
HDAC6-201ENST00000334136 CYP3A7-CYP3A51PA0A087WV96 503 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 SOWAHBA6NEL2 793 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 MYMKA6NI61 221 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 MSCO60682 206 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 ATP9AO75110 1047 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF286BP0CG31 522 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 CYP3A7P24462 503 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 GRB10Q13322 594 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 FSCN1Q16658 493 aaKnown RBP12.7□□□□□ -0.38
HDAC6-201ENST00000334136 TWF2Q6IBS0 349 aaKnown RBP12.7□□□□□ -0.38
HDAC6-201ENST00000334136 SLFN12LQ6IEE8 588 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 TRIM50Q86XT4 487 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 THNSL1Q8IYQ7 743 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 MAML3Q96JK9 1138 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 INPP4AQ96PE3 977 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-201ENST00000334136 CYP26B1Q9NR63 512 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 PDGFCQ9NRA1 345 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 ODF2LQ9ULJ1 636 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 ZNF536O15090 1300 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 CLDN3O15551 220 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 TNNC2P02585 160 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 GCKP35557 465 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 VPS41P49754 854 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 ZBED6P86452 979 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 DENND2CQ68D51 928 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 FAM133AQ8N9E0 248 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 REEP2Q9BRK0 252 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 STARD7Q9NQZ5 370 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 KCND2Q9NZV8 630 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 PGK1P00558 417 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 ATP1A1P05023 1023 aaKnown RBP12.7□□□□□ -0.38
HDAC6-201ENST00000334136 DESP17661 470 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 CYP11B2P19099 503 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 NR1D1P20393 614 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 MUTP22033 750 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 ATP11AP98196 1134 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 CDC42EP1Q00587 391 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 BEX3Q00994 111 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 PRKCZQ05513 592 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 CELF3Q5SZQ8 465 aaKnown RBP12.7□□□□□ -0.38
HDAC6-201ENST00000334136 SEL1L2Q5TEA6 688 aa12.7□□□□□ -0.38
HDAC6-201ENST00000334136 IER5Q5VY09 327 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms