RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 PDCLQ13371 301 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 ALG6Q9Y672 507 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 ADGRA3Q8IWK6 1321 aa20.45■□□□□ 0.86
RFTN1-201ENST00000334133 ANKRD62A6NC57 917 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 GOLGA8KD6RF30 607 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 CCDC172P0C7W6 258 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 CEP85LQ5SZL2 805 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 TAS1R2Q8TE23 839 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 ISCUQ9H1K1 167 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 RGS20O76081 388 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 DMP1Q13316 513 aaPredicted RBP20.44■□□□□ 0.86
RFTN1-201ENST00000334133 CYFIP1Q7L576 1253 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 TEX2Q8IWB9 1127 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 POMGNT1Q8WZA1 660 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 CAPS2Q9BXY5 557 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 NCANO14594 1321 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 DOCK5Q9H7D0 1870 aa20.44■□□□□ 0.86
RFTN1-201ENST00000334133 PFASO15067 1338 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 SLC39A4Q6P5W5 647 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 SEPT9Q9UHD8 586 aaPredicted RBP20.43■□□□□ 0.86
RFTN1-201ENST00000334133 CES2O00748 559 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 ZEB2O60315 1214 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 CHRNB2P17787 502 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 NCKAP1LP55160 1127 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 BACE1P56817 501 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 TATDN2Q93075 761 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 MOV10L1Q9BXT6 1211 aaKnown RBP20.43■□□□□ 0.86
RFTN1-201ENST00000334133 CWC15Q9P013 229 aaKnown RBP20.43■□□□□ 0.86
RFTN1-201ENST00000334133 PCDHA10Q9Y5I2 948 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 HSD17B3P37058 310 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 SF3B2Q13435 895 aaKnown RBP20.43■□□□□ 0.86
RFTN1-201ENST00000334133 C2CD6Q53TS8 623 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 VSIG10LQ86VR7 867 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 RASGEF1CQ8N431 466 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 EPS8L1Q8TE68 723 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 UBLCP1Q8WVY7 318 aaPredicted RBP20.43■□□□□ 0.86
RFTN1-201ENST00000334133 BICD1Q96G01 975 aa20.43■□□□□ 0.86
RFTN1-201ENST00000334133 JAK3P52333 1124 aa20.42■□□□□ 0.86
RFTN1-201ENST00000334133 SMTNP53814 917 aa20.42■□□□□ 0.86
RFTN1-201ENST00000334133 KRT76Q01546 638 aa20.42■□□□□ 0.86
RFTN1-201ENST00000334133 FSTL1Q12841 308 aa20.42■□□□□ 0.86
RFTN1-201ENST00000334133 HNRNPDLO14979 420 aaKnown RBP20.42■□□□□ 0.86
RFTN1-201ENST00000334133 LYPLA2O95372 231 aa20.42■□□□□ 0.86
RFTN1-201ENST00000334133 SSTR3P32745 418 aaPredicted RBP20.42■□□□□ 0.86
RFTN1-201ENST00000334133 HPDP32754 393 aaPredicted RBP20.42■□□□□ 0.86
RFTN1-201ENST00000334133 UAP1Q16222 522 aaPredicted RBP20.42■□□□□ 0.86
RFTN1-201ENST00000334133 ANGEL2Q5VTE6 544 aaKnown RBP20.42■□□□□ 0.86
RFTN1-201ENST00000334133 CCDC60Q8IWA6 550 aaPredicted RBP20.42■□□□□ 0.86
RFTN1-201ENST00000334133 WHAMMQ8TF30 809 aa20.42■□□□□ 0.86
RFTN1-201ENST00000334133 FAM213AQ9BRX8 229 aa20.42■□□□□ 0.86
RFTN1-201ENST00000334133 LRRC4CQ9HCJ2 640 aa20.42■□□□□ 0.86
RFTN1-201ENST00000334133 BCCIPQ9P287 314 aaKnown RBP eCLIP20.42■□□□□ 0.86
RFTN1-201ENST00000334133 CLSTN1O94985 981 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 TMEM132BQ14DG7 1078 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 MTERF2Q49AM1 385 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 C10orf67Q8IYJ2 551 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 PARD3BQ8TEW8 1205 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 CCND2P30279 289 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 ZNF280AP59817 542 aaPredicted RBP20.41■□□□□ 0.86
RFTN1-201ENST00000334133 GUCY1A3Q02108 690 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 ALCAMQ13740 583 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 ZNF280CQ8ND82 737 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 CALR3Q96L12 384 aaKnown RBP20.41■□□□□ 0.86
RFTN1-201ENST00000334133 PICK1Q9NRD5 415 aa20.41■□□□□ 0.86
RFTN1-201ENST00000334133 MAPTP10636 758 aaKnown RBP20.4■□□□□ 0.86
RFTN1-201ENST00000334133 KRT5P13647 590 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 PTPRAP18433 802 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 COMTP21964 271 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 CCT5P48643 541 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 MYBPC2Q14324 1141 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 ZNF526Q8TF50 670 aaPredicted RBP20.4■□□□□ 0.86
RFTN1-201ENST00000334133 RRP15Q9Y3B9 282 aaKnown RBP20.4■□□□□ 0.86
RFTN1-201ENST00000334133 IVLP07476 585 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 NOCTQ9UK39 431 aaKnown RBP20.4■□□□□ 0.86
RFTN1-201ENST00000334133 SFNP31947 248 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 BAG6P46379 1132 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 GPC5P78333 572 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 GHRHRQ02643 423 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 LLGL2Q6P1M3 1020 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 BCAS4Q8TDM0 211 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 C18orf8Q96DM3 657 aa20.4■□□□□ 0.86
RFTN1-201ENST00000334133 ZNF214Q9UL59 606 aaPredicted RBP20.4■□□□□ 0.86
RFTN1-201ENST00000334133 TCRBV7S2A1N4TA0A589 114 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 CCDC188H7C350 402 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 KCNA2P16389 499 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 CTNNA1P35221 906 aaKnown RBP20.39■□□□□ 0.85
RFTN1-201ENST00000334133 KRT39Q6A163 491 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 SV2AQ7L0J3 742 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 MAP4K3Q8IVH8 894 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 C12orf56Q8IXR9 622 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 SCYL3Q8IZE3 742 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 CCDC26Q8TAB7 109 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 TMEM143Q96AN5 459 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 XPNPEP1Q9NQW7 623 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 FMO1Q01740 532 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 SP2Q02086 613 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 FAM71AQ8IYT1 594 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 A1CFQ9NQ94 594 aaKnown RBP20.39■□□□□ 0.85
RFTN1-201ENST00000334133 ANKEF1Q9NU02 776 aa20.39■□□□□ 0.85
RFTN1-201ENST00000334133 GRIN2DO15399 1336 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms