RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 TTI2Q6NXR4 508 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 BSNDQ8WZ55 320 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 VTI1AQ96AJ9 217 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 L2HGDHQ9H9P8 463 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 CHST12Q9NRB3 414 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 AKT3Q9Y243 479 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 GDAQ9Y2T3 454 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 NFE2L3Q9Y4A8 694 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 TRPV2Q9Y5S1 764 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 ZMYM2Q9UBW7 1377 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 DENND3A2RUS2 1198 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 TREHO43280 583 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 ZNF18P17022 549 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 CBX1P83916 185 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 SYT10Q6XYQ8 523 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 SLC39A5Q6ZMH5 540 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 TSHZ1Q6ZSZ6 1077 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 NECAB2Q7Z6G3 386 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 RHPN2Q8IUC4 686 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 RNF149Q8NC42 400 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 RSPH1Q8WYR4 309 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 CELF4Q9BZC1 486 aaKnown RBP10.38□□□□□ -0.75
C11orf54-201ENST00000331239 TMX1Q9H3N1 280 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 IFT122Q9HBG6 1241 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 GPRC5CQ9NQ84 441 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 DMAC2Q9NW81 257 aa10.38□□□□□ -0.75
C11orf54-201ENST00000331239 LRRIQ4A6NIV6 560 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 SFI1A8K8P3 1242 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 SLC16A4O15374 487 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 DARSP14868 501 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 CD44P16070 742 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 EEF1GP26641 437 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 NMT1P30419 496 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 CLCN3P51790 818 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 RAD51AP2Q09MP3 1159 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 TRIM71Q2Q1W2 868 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 ANKRD20A12PQ8NF67 263 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 ZNF397Q8NF99 534 aaPredicted RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 TRAPPC12Q8WVT3 735 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 CTAGE1Q96RT6 745 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 C11orf49Q9H6J7 331 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 METTL14Q9HCE5 456 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 TNFSF13BQ9Y275 285 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 CNTNAP2Q9UHC6 1331 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 LRRC10BA6NIK2 292 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 DCDC2CA8MYV0 355 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 CETN3O15182 167 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 MYBP10242 640 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 EIF4BP23588 611 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 RFC2P35250 354 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 ETF1P62495 437 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 CACNB1Q02641 598 aaPredicted RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 MBTD1Q05BQ5 628 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 MGAT3Q09327 533 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 USP37Q86T82 979 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 FAM126BQ8IXS8 530 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 SYCP3Q8IZU3 236 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 LRRC71Q8N4P6 559 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 IPO4Q8TEX9 1081 aaKnown RBP10.37□□□□□ -0.75
C11orf54-201ENST00000331239 TRAIPQ9BWF2 469 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 SEMA6BQ9H3T3 888 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 NOD1Q9Y239 953 aa10.37□□□□□ -0.75
C11orf54-201ENST00000331239 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 N4BP3O15049 544 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 ARHGAP6O43182 974 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 TOM1L1O75674 476 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 PRKCBP05771 671 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 HOXD13P35453 343 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 VASPP50552 380 aaPredicted RBP10.36□□□□□ -0.75
C11orf54-201ENST00000331239 IRX5P78411 483 aaPredicted RBP10.36□□□□□ -0.75
C11orf54-201ENST00000331239 TBX2Q13207 712 aaPredicted RBP10.36□□□□□ -0.75
C11orf54-201ENST00000331239 ELF2Q15723 593 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 HSP90AA4PQ58FG1 418 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 FAM47CQ5HY64 1035 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 MAEAQ7L5Y9 396 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 UBE2Q1Q7Z7E8 422 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 SENP6Q9GZR1 1112 aaPredicted RBP10.36□□□□□ -0.75
C11orf54-201ENST00000331239 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.36□□□□□ -0.75
C11orf54-201ENST00000331239 V9GYY5 206 aaPredicted RBP10.36□□□□□ -0.75
C11orf54-201ENST00000331239 GPR182O15218 404 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 TGFB1I1O43294 461 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 ZSCAN12O43309 604 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 PRPF6O94906 941 aaKnown RBP10.36□□□□□ -0.75
C11orf54-201ENST00000331239 PROZP22891 400 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 NLRP11P59045 1033 aaKnown RBP10.36□□□□□ -0.75
C11orf54-201ENST00000331239 HIC1Q14526 733 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 SURF1Q15526 300 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 PTPN21Q16825 1174 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 DCAF4L1Q3SXM0 396 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 CDKAL1Q5VV42 579 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 SPECC1LQ69YQ0 1117 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 RUFY4Q6ZNE9 571 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 FRMD5Q7Z6J6 570 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 DNAJB3Q8WWF6 145 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 NLRP7Q8WX94 980 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 FBXL18Q96ME1 805 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 SH2D3AQ9BRG2 576 aa10.36□□□□□ -0.75
C11orf54-201ENST00000331239 SRGAP2CP0DJJ0 459 aa10.35□□□□□ -0.75
C11orf54-201ENST00000331239 MCF2P10911 925 aa10.35□□□□□ -0.75
C11orf54-201ENST00000331239 SKIP12755 728 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms